RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 WNT16Q9UBV4 365 aa18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 FBXO10Q9UK96 956 aa18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 HPCAL4Q9UM19 191 aa18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 COL4A2P08572 1712 aa18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 NYNRINQ9P2P1 1898 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
RBFOX1-222ENST00000585867 E7EVH7 732 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 TULP3O75386 442 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 GLULP15104 373 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 PTPN3P26045 913 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 CTHP32929 405 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 PAPOLAP51003 745 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 WASHC5Q12768 1159 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 KCNJ11Q14654 390 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 PARP6Q2NL67 630 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 C6orf118Q5T5N4 469 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 TRMT10CQ7L0Y3 403 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 CCDC25Q86WR0 208 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 RELL1Q8IUW5 271 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 TP53INP2Q8IXH6 220 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 FIBINQ8TAL6 211 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 WFDC5Q8TCV5 224 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 LRRN4Q8WUT4 740 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 PPP1R2P1Q96PQ5 205 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 RUFY1Q96T51 708 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 TXLNGYQ9BZA5 131 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 DEC1Q9P2X7 70 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 ZNF212Q9UDV6 495 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 FBXL21Q9UKT6 434 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 CA14Q9ULX7 337 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
RBFOX1-222ENST00000585867 RASA4BC9J798 803 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TRIM24O15164 1050 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 MATN3O15232 486 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 EIF3HO15372 352 aaKnown RBP eCLIP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 RASA4O43374 803 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TPSB2P20231 275 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 EIF2DP41214 584 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 DGKGP49619 791 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 GALK1P51570 392 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ARL4CP56559 192 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 IFI35P80217 286 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 SARNPP82979 210 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 SEMA5AQ13591 1074 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 POLD3Q15054 466 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TPSAB1Q15661 275 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 MLF2Q15773 248 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 FSCBQ5H9T9 825 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NAIF1Q69YI7 327 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ASTLQ6HA08 431 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 CENPUQ71F23 418 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 SETD3Q86TU7 594 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ZNF567Q8N184 647 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ZNF557Q8N988 423 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NETO2Q8NC67 525 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NSMCE1Q8WV22 266 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 UBLCP1Q8WVY7 318 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 EIF2B3Q9NR50 452 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NDFIP2Q9NV92 336 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 COL4A3Q01955 1670 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NUP205Q92621 2012 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 UNC80Q8N2C7 3258 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 KCNK1O00180 336 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 MAFKO60675 156 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 SASH3O75995 380 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 CISD3P0C7P0 127 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 HSD17B3P37058 310 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ETFBP38117 255 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NRLP54845 237 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ZXDAP98168 799 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 CDK16Q00536 496 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 HIF1AQ16665 826 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TEX44Q53QW1 395 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 GRAMD4Q6IC98 578 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TXNDC11Q6PKC3 985 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ZNF783Q6ZMS7 281 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TPRG1Q6ZUI0 275 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 PID1Q7Z2X4 250 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 MSANTD3Q96H12 275 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 P2RY13Q9BPV8 354 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 MAGEH1Q9H213 219 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 PABPC3Q9H361 631 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 SP110Q9HB58 689 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 ETNK1Q9HBU6 452 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 HAUS2Q9NVX0 235 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 KIAA1522Q9P206 1035 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 IPO11Q9UI26 975 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 TBC1D30Q9Y2I9 924 aa18.17■□□□□ 0.5
RBFOX1-222ENST00000585867 GOLGA6CA6NDK9 693 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 GOLGA6BA6NDN3 693 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 NEBLO76041 1014 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 RHOCP08134 193 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 GOLGA6DP0CG33 693 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 CCNB1P14635 433 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 HLA-FP30511 346 aa18.16■□□□□ 0.5
RBFOX1-222ENST00000585867 CD70P32970 193 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms