RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 Q6ZVU0 165 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 MMAAQ8IVH4 418 aaKnown RBP14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 STK40Q8N2I9 435 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 BBS5Q8N3I7 341 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 OR2A12Q8NGT7 310 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 RLN3Q8WXF3 142 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 TSC1Q92574 1164 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 HSPH1Q92598 858 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 ZNF599Q96NL3 588 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 CSPG4P5Q96PW8 444 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 OMDQ99983 421 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 PCDH18Q9HCL0 1135 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 GPATCH2LQ9NWQ4 482 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 FBXL12Q9NXK8 326 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 CWC15Q9P013 229 aaKnown RBP14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 UBA2Q9UBT2 640 aaPredicted RBP14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 PPM1HQ9ULR3 514 aa14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
PRKCSH-202ENST00000585540 DCLK1O15075 740 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 PRAMEF11O60813 436 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 SEMA4FO95754 770 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 IGSF6O95976 241 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 CHRNA3P32297 505 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 ACVRL1P37023 503 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 HSPA9P38646 679 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 CREB5Q02930 508 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 IL10RBQ08334 325 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 MESDQ14696 234 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 ODF2Q5BJF6 829 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 CARD16Q5EG05 197 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 C11orf63Q6NUN7 778 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 NEK5Q6P3R8 708 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 CPNE8Q86YQ8 564 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 RHOT1Q8IXI2 618 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 C12orf50Q8NA57 414 aaPredicted RBP14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 OR2AP1Q8NGE2 309 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 OR2T34Q8NGX1 318 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 PIP4K2CQ8TBX8 421 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 FAF2Q96CS3 445 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 HEPHQ9BQS7 1158 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 DESI2Q9BSY9 194 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 MAGEB5Q9BZ81 275 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 NOL6Q9H6R4 1146 aaKnown RBP14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 SP110Q9HB58 689 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 SEMA4GQ9NTN9 838 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 MFHAS1Q9Y4C4 1052 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 NUP205Q92621 2012 aa14.07□□□□□ -0.16
PRKCSH-202ENST00000585540 RIF1Q5UIP0 2472 aaKnown RBP14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 CEP192Q8TEP8 1941 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 RCCD1A6NED2 376 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 METTL12A8MUP2 240 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 MEI4A8MW99 385 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 MID1O15344 667 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 BUB1O43683 1085 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 MT-CO1P00395 513 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 TCF4P15884 667 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 ZFXP17010 805 aaPredicted RBP14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 MX2P20592 715 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 NOP2P46087 812 aaKnown RBP14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 PSMD8P48556 350 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 CSNK1DP48730 415 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 RENBPP51606 427 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 SUOXP51687 545 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 ARSEP51690 589 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 VAV2P52735 878 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 LIMK1P53667 647 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 LPAL2Q16609 132 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 DUOXA1Q1HG43 343 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 RALGPS1Q5JS13 557 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 TIGD7Q6NT04 549 aaPredicted RBP14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 PRR23CQ6ZRP0 262 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 LRRC8AQ8IWT6 810 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 KCTD6Q8NC69 237 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 HCAR2Q8TDS4 363 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 FATE1Q969F0 183 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 RAB7BQ96AH8 199 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 HSPA12BQ96MM6 686 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 NUSAP1Q9BXS6 441 aaKnown RBP14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 SLC6A17Q9H1V8 727 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 ARRDC1-AS1Q9H2J1 176 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 PDFQ9HBH1 243 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 PREBQ9HCU5 417 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 AMACRQ9UHK6 382 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 PILRBQ9UKJ0 227 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 RALGAPA1Q6GYQ0 2036 aa14.06□□□□□ -0.16
PRKCSH-202ENST00000585540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 A0A0U1RQJ8 604 aa14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 A0A1W2PP55 124 aa14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 A0A1W2PQ67 120 aa14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 KHNYNO15037 678 aaKnown RBP14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 PJA2O43164 708 aa14.05□□□□□ -0.16
PRKCSH-202ENST00000585540 SPOPO43791 374 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms