RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 ZNF510Q9Y2H8 683 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 IKBKGQ9Y6K9 419 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 GREB1Q4ZG55 1949 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 MYO16Q9Y6X6 1858 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 SPTBN4Q9H254 2564 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 SMIM23A6NLE4 172 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 SOBPA7XYQ1 873 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 RASA4BC9J798 803 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 H0Y858 1186 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ZBTB24O43167 697 aaPredicted RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 RASA4O43374 803 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 LRG1P02750 347 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 F11P03951 625 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 HMBSP08397 361 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 PSMB4P28070 264 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CDC25CP30307 473 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 HPDP32754 393 aaPredicted RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 ETFBP38117 255 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 SLCO1A2P46721 670 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 PAPOLAP51003 745 aaKnown RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 SLC18A1P54219 525 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CDH4P55283 916 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 GAD2Q05329 585 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 NAB1Q13506 487 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 FRG1Q14331 258 aaKnown RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 ADGRF1Q5T601 910 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 FAXCQ5TGI0 409 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 RAP1GAP2Q684P5 730 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 KCTD11Q693B1 232 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CHST9Q7L1S5 443 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CCDC117Q8IWD4 279 aaPredicted RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 PLCD3Q8N3E9 789 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CCDC33Q8N5R6 958 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 GSDMBQ8TAX9 411 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ZSCAN18Q8TBC5 510 aaPredicted RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 FBF1Q8TES7 1133 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 TTC17Q96AE7 1141 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ZBTB9Q96C00 473 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 STAMBPL1Q96FJ0 436 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ZNF599Q96NL3 588 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 KLF16Q9BXK1 252 aaPredicted RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 MAGEH1Q9H213 219 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 GLOD4Q9HC38 313 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 EURLQ9NYK6 297 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 MPP6Q9NZW5 540 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 DPP7Q9UHL4 492 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 STOML2Q9UJZ1 356 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 CHMP2BQ9UQN3 213 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 ZNF638Q14966 1978 aaKnown RBP10.59□□□□□ -0.71
LIG3-203ENST00000585370 DCHS1Q96JQ0 3298 aa10.59□□□□□ -0.71
LIG3-203ENST00000585370 IQANK1A0A1B0GTG1 560 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 POC1B-GALNT4F8VUJ3 575 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 TGM5O43548 720 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 RAMP2O60895 175 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 CLDN11O75508 207 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 STC2O76061 302 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 PGAM1P18669 254 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 PRKCHP24723 683 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 SSTR1P30872 391 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 IRAK1P51617 712 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 NUBP1P53384 320 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 GNGT1P63211 74 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 IL10RBQ08334 325 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 SKIDA1Q1XH10 827 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 HP1BP3Q5SSJ5 553 aaPredicted RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 UBAP2Q5T6F2 1119 aaKnown RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 STEAP4Q687X5 459 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ELMSAN1Q6PJG2 1045 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ZNF783Q6ZMS7 281 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ZNF534Q76KX8 674 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 SETD3Q86TU7 594 aaPredicted RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 LGI2Q8N0V4 545 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 BBS5Q8N3I7 341 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 TMEM105Q8N8V8 129 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 LRRN4Q8WUT4 740 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 MRPS31Q92665 395 aaKnown RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 IGSF8Q969P0 613 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ALKBH8Q96BT7 664 aaKnown RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 AGAP3Q96P47 875 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 GCNAQ96QF7 691 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 XPO6Q96QU8 1125 aaKnown RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 DHRS4Q9BTZ2 278 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 SSU72Q9NP77 194 aaKnown RBP10.58□□□□□ -0.72
LIG3-203ENST00000585370 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 VPS45Q9NRW7 570 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 RBM22Q9NW64 420 aaKnown RBP eCLIP10.58□□□□□ -0.72
LIG3-203ENST00000585370 SAMD15Q9P1V8 674 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ZMYM5Q9UJ78 669 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 ZNF180Q9UJW8 692 aa10.58□□□□□ -0.72
LIG3-203ENST00000585370 MAD1L1Q9Y6D9 718 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms