RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SLC6A11P48066 632 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 SERPINH1P50454 418 aaKnown RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 GPS1Q13098 491 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 SEMA5AQ13591 1074 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 NAA30Q147X3 362 aaPredicted RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 EIF4HQ15056 248 aaKnown RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 KCTD19Q17RG1 926 aaPredicted RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 GEN1Q17RS7 908 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 PARP6Q2NL67 630 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 TMEM215Q68D42 235 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 MBLAC2Q68D91 279 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 ARHGEF18Q6ZSZ5 1173 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 PID1Q7Z2X4 250 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 METTL3Q86U44 580 aaKnown RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 BBOF1Q8ND07 529 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 PNKPQ96T60 521 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 MGME1Q9BQP7 344 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 CEP41Q9BYV8 373 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 FAM129AQ9BZQ8 928 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 EPB41L5Q9HCM4 733 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 FAM114A2Q9NRY5 505 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 RAB21Q9UL25 225 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 SNX24Q9Y343 169 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 FARP1Q9Y4F1 1045 aaPredicted RBP16.43■□□□□ 0.22
SS18-226ENST00000585241 TICRRQ7Z2Z1 1910 aa16.43■□□□□ 0.22
SS18-226ENST00000585241 EYSQ5T1H1 3165 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 TMCC1O94876 653 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 METTL18O95568 372 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 ASLP04424 464 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 ITIH2P19823 946 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 ADCY8P40145 1251 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 VPS41P49754 854 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 CUL1Q13616 776 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 CYTH1Q15438 398 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 ELF2Q15723 593 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 PREPLQ4J6C6 727 aaPredicted RBP16.42■□□□□ 0.22
SS18-226ENST00000585241 RNASEH2BQ5TBB1 312 aaKnown RBP16.42■□□□□ 0.22
SS18-226ENST00000585241 ADHFE1Q8IWW8 467 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
SS18-226ENST00000585241 BBS5Q8N3I7 341 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 PGBD5Q8N414 524 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 TERB1Q8NA31 727 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 CSGALNACT1Q8TDX6 532 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 USP33Q8TEY7 942 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 PPP1R2P1Q96PQ5 205 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 FCRL5Q96RD9 977 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 GORASP1Q9BQQ3 440 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 GLOD4Q9HC38 313 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 SLC2A4RGQ9NR83 387 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 TPX2Q9ULW0 747 aaKnown RBP16.42■□□□□ 0.22
SS18-226ENST00000585241 ACTL7AQ9Y615 435 aa16.42■□□□□ 0.22
SS18-226ENST00000585241 MYO18AQ92614 2054 aaKnown RBP16.42■□□□□ 0.22
SS18-226ENST00000585241 SMAPO00193 183 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ASGR2P07307 311 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
SS18-226ENST00000585241 NFKB1P19838 968 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 CR2P20023 1033 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 PSMB4P28070 264 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ECHS1P30084 290 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ZP2Q05996 745 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 MESP2Q0VG99 397 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ZNF235Q14590 738 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 KCNJ11Q14654 390 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 MORF4L2Q15014 288 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 TRADDQ15628 312 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 SLC14A2Q15849 920 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 FAM182AQ5T1J6 154 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 IZUMO3Q5VZ72 239 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 HIBCHQ6NVY1 386 aaPredicted RBP16.41■□□□□ 0.22
SS18-226ENST00000585241 ZDHHC24Q6UX98 284 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 PCGF5Q86SE9 256 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 HOOK3Q86VS8 718 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 NAT8LQ8N9F0 302 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 CPT1BQ92523 772 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ISG20Q96AZ6 181 aaKnown RBP16.41■□□□□ 0.22
SS18-226ENST00000585241 TADA1Q96BN2 335 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 MSANTD3Q96H12 275 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 MRGPRX3Q96LB0 322 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 AGAP3Q96P47 875 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 TRIM31Q9BZY9 425 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 SLC25A51Q9H1U9 297 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 C8orf33Q9H7E9 229 aaPredicted RBP16.41■□□□□ 0.22
SS18-226ENST00000585241 ETNK1Q9HBU6 452 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 EIF2B3Q9NR50 452 aaKnown RBP16.41■□□□□ 0.22
SS18-226ENST00000585241 RAB6BQ9NRW1 208 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 ZDHHC18Q9NUE0 388 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 LHX3Q9UBR4 397 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 RSPH14Q9UHP6 348 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 SHOC2Q9UQ13 582 aa16.41■□□□□ 0.22
SS18-226ENST00000585241 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
SS18-226ENST00000585241 PRRT4C9JH25 899 aa16.4■□□□□ 0.22
SS18-226ENST00000585241 MUSKO15146 869 aa16.4■□□□□ 0.22
SS18-226ENST00000585241 TIMM44O43615 452 aa16.4■□□□□ 0.22
SS18-226ENST00000585241 MT-CO1P00395 513 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms