RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SERGEFQ9UGK8 458 aa16.58■□□□□ 0.24
ERBB2-222ENST00000584908 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
ERBB2-222ENST00000584908 NCKAP1Q9Y2A7 1128 aa16.58■□□□□ 0.24
ERBB2-222ENST00000584908 FARP1Q9Y4F1 1045 aaPredicted RBP16.58■□□□□ 0.24
ERBB2-222ENST00000584908 IL1BP01584 269 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 PSMD8P48556 350 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 CCDC6Q16204 474 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 HADHQ16836 314 aaKnown RBP16.57■□□□□ 0.24
ERBB2-222ENST00000584908 WDR45BQ5MNZ6 344 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 SYCP2LQ5T4T6 812 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 RABEPKQ7Z6M1 372 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 FAM124AQ86V42 546 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 LZTR1Q8N653 840 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 PIGKQ92643 395 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 HMCESQ96FZ2 354 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.57■□□□□ 0.24
ERBB2-222ENST00000584908 RCOR3Q9P2K3 495 aaPredicted RBP16.57■□□□□ 0.24
ERBB2-222ENST00000584908 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.57■□□□□ 0.24
ERBB2-222ENST00000584908 PCDH15Q96QU1 1955 aa16.57■□□□□ 0.24
ERBB2-222ENST00000584908 A0A1W2PP55 124 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 C1QTNF3-AMACRE9PGA6 284 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 H3BRJ5 948 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 SLC7A4O43246 635 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 DAPK3O43293 454 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 SEMA4FO95754 770 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 CTSLP07711 333 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 CHRNA3P32297 505 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 ARL4AP40617 200 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 ARSEP51690 589 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 HADHBP55084 474 aaKnown RBP16.56■□□□□ 0.24
ERBB2-222ENST00000584908 SF3A2Q15428 464 aaKnown RBP16.56■□□□□ 0.24
ERBB2-222ENST00000584908 SLC23A3Q6PIS1 610 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 DPY19L3Q6ZPD9 716 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 ARHGAP12Q8IWW6 846 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 DEFB119Q8N690 84 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 C1orf216Q8TAB5 229 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 CEP76Q8TAP6 659 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 PIP4K2CQ8TBX8 421 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 CSPG4P5Q96PW8 444 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 OMDQ99983 421 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 C6orf106Q9H6K1 298 aaPredicted RBP16.56■□□□□ 0.24
ERBB2-222ENST00000584908 PDFQ9HBH1 243 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 PCDH18Q9HCL0 1135 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 ACTL7AQ9Y615 435 aa16.56■□□□□ 0.24
ERBB2-222ENST00000584908 RNASEH2AO75792 299 aaKnown RBP16.55■□□□□ 0.24
ERBB2-222ENST00000584908 GSRP00390 522 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 PRNPP04156 253 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 IL4RP24394 825 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 CYLC1P35663 651 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-222ENST00000584908 RECQLP46063 649 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-222ENST00000584908 METAP1P53582 386 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 LIMK1P53667 647 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 DUOXA1Q1HG43 343 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 CARD16Q5EG05 197 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 DCAF12L1Q5VU92 463 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 CPNE8Q86YQ8 564 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 TMTC1Q8IUR5 882 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 HDDC3Q8N4P3 179 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 NPWQ8N729 165 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 HSPH1Q92598 858 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 VOPP1Q96AW1 172 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 SLC39A8Q9C0K1 460 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 KDM4CQ9H3R0 1056 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 IMPACTQ9P2X3 320 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 SUSD2Q9UGT4 822 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-222ENST00000584908 FCF1Q9Y324 198 aaKnown RBP16.55■□□□□ 0.24
ERBB2-222ENST00000584908 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 CACNA1AO00555 2505 aa16.55■□□□□ 0.24
ERBB2-222ENST00000584908 ARHGAP42A6NI28 874 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 PATE3B3GLJ2 98 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
ERBB2-222ENST00000584908 BUB1O43683 1085 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 PRAMEF11O60813 436 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 SERPINF2P08697 491 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 KRT7P08729 469 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 MAGEA1P43355 309 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 CCNHP51946 323 aaPredicted RBP16.54■□□□□ 0.24
ERBB2-222ENST00000584908 ADPRHP54922 357 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 TAS2R40P59535 323 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 AGBL4Q5VU57 503 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 TCEAL6Q6IPX3 200 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 C12orf50Q8NA57 414 aaPredicted RBP16.54■□□□□ 0.24
ERBB2-222ENST00000584908 CHST14Q8NCH0 376 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 OR2AP1Q8NGE2 309 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 OR2T34Q8NGX1 318 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 NETO1Q8TDF5 533 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 GANCQ8TET4 914 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 TCEAL3Q969E4 200 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 CELF6Q96J87 481 aaKnown RBP16.54■□□□□ 0.24
ERBB2-222ENST00000584908 LRIG1Q96JA1 1093 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 HEPHQ9BQS7 1158 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 CAPN10Q9HC96 672 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 DLL3Q9NYJ7 618 aa16.54■□□□□ 0.24
ERBB2-222ENST00000584908 IL36AQ9UHA7 158 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms