RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 HOMER3Q9NSC5 361 aa12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 RBM22Q9NW64 420 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 CACNA2D2Q9NY47 1150 aa12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 STARD13Q9Y3M8 1113 aa12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 TTLL3Q9Y4R7 772 aa12.61□□□□□ -0.39
CDK5R1-202ENST00000584716 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 SGK1O00141 431 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 PHF2O75151 1096 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TMCC1O94876 653 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 KLF8O95600 359 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 PDGFBP01127 241 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CHRNB1P11230 501 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 ETS1P14921 441 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 PTPN3P26045 913 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 IL12RB1P42701 662 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 KIR2DL1P43626 348 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 MMP13P45452 471 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 RENBPP51606 427 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 GDF10P55107 478 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 GEMIN4P57678 1058 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 MAXP61244 160 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 RHOAP61586 193 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CKAP4Q07065 602 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 ZBTB17Q13105 803 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CCINQ13939 588 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 ZNF235Q14590 738 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 DGKKQ5KSL6 1271 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 SDE2Q6IQ49 451 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TTC27Q6P3X3 843 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CCDC137Q6PK04 289 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 SERPINA13PQ6UXR4 307 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CCDC105Q8IYK2 499 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 CHPFQ8IZ52 775 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TXNDC5Q8NBS9 432 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 MYO19Q96H55 970 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 ZNF599Q96NL3 588 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 AGAP3Q96P47 875 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 NELL2Q99435 816 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 FERMT1Q9BQL6 677 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 DDX47Q9H0S4 455 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 USP29Q9HBJ7 922 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
CDK5R1-202ENST00000584716 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 RNF103O00237 685 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 IFNB1P01574 187 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 EPHX1P07099 455 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 ALADP13716 330 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 PRKCHP24723 683 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 WASHC5Q12768 1159 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 LRRC32Q14392 662 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 OASLQ15646 514 aaKnown RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 FBXO43Q4G163 708 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 TEX44Q53QW1 395 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 INO80DQ53TQ3 878 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 Q6ZS52 159 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 PID1Q7Z2X4 250 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 BBS5Q8N3I7 341 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 PGBD5Q8N414 524 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 TAB3Q8N5C8 712 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 IL17RCQ8NAC3 791 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 TSEN2Q8NCE0 465 aaKnown RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 ATL2Q8NHH9 583 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 MAML1Q92585 1016 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 KRT12Q99456 494 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 TM6SF2Q9BZW4 377 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 POLR3BQ9NW08 1133 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 SEPT3Q9UH03 358 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 HS3ST2Q9Y278 367 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 SIT1Q9Y3P8 196 aa12.59□□□□□ -0.39
CDK5R1-202ENST00000584716 MUC22E2RYF6 1773 aaPredicted RBP12.58□□□□□ -0.39
CDK5R1-202ENST00000584716 CCDC188H7C350 402 aa12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 MUSKO15146 869 aa12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 ATP9BO43861 1147 aa12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 GJB3O75712 270 aa12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 STK10O94804 968 aaKnown RBP12.58□□□□□ -0.4
CDK5R1-202ENST00000584716 HLA-DQB2P05538 268 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms