RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CCNG1P51959 295 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CACNA2D1P54289 1103 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC34A1Q06495 639 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MRPL58Q14197 206 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C1orf146Q5VVC0 180 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 IZUMO2Q6UXV1 221 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C18orf25Q96B23 403 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 VPS11Q9H270 941 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLAC1Q9HBJ0 212 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRPM7Q96QT4 1865 aa11.82□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CCDC78A2IDD5 438 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 F2P00734 622 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MSX2P35548 267 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 FCGRTP55899 365 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CAP1Q01518 475 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ACY1Q03154 408 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GOLGA7BQ2TAP0 167 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DENND5BQ6ZUT9 1274 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RNF169Q8NCN4 708 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SLC44A1Q8WWI5 657 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PANX3Q96QZ0 392 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 BARD1Q99728 777 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF518BQ9C0D4 1074 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRIP11Q15643 1979 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 I3L4J1 428 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TM9SF1O15321 606 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 S100A6P06703 90 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 KRT7P08729 469 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RARBP10826 455 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 AKR1A1P14550 325 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ST13P50502 369 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CCDC14Q49A88 953 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LPCAT4Q643R3 524 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ARHGAP11AQ6P4F7 1023 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CEP128Q6ZU80 1094 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 OR6C4Q8NGE1 309 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SOCS4Q8WXH5 440 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MCRS1Q96EZ8 462 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DRC3Q9H069 523 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 NXF3Q9H4D5 531 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SAR1AQ9NR31 198 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MAN1C1Q9NR34 630 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZNF358Q9NW07 568 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LNPEPQ9UIQ6 1025 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TEX264Q9Y6I9 313 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ANK1P16157 1881 aa11.81□□□□□ -0.52
CDK5RAP3-231ENST00000584063 HTR3EA5X5Y0 456 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMCC2O75069 709 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 METTL18O95568 372 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 AP3M2P53677 418 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CEP78Q5JTW2 689 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CMASQ8NFW8 434 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 DHRS4Q9BTZ2 278 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PREBQ9HCU5 417 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CACNG4Q9UBN1 327 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SNX9Q9Y5X1 595 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRIP12Q14669 1992 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 C2CD4BA6NLJ0 364 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 APOC4-APOC2K7ER74 178 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TRAFD1O14545 582 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ZBED1O96006 694 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 APOC2P02655 101 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GPD1P21695 349 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PTPN7P35236 360 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ARHGDIBP52566 201 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SESN2P58004 480 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TMEM132DQ14C87 1099 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPM1JQ5JR12 505 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 TCHHL1Q5QJ38 904 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MFSD14CQ5VZR4 134 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ATG14Q6ZNE5 492 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CAND1Q86VP6 1230 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 SCUBE1Q8IWY4 988 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PYROXD2Q8N2H3 581 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PLD5Q8N7P1 536 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PPFIBP2Q8ND30 876 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 FAM172AQ8WUF8 416 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 RELTQ969Z4 430 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 THAP11Q96EK4 314 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 LHX5Q9H2C1 402 aa11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 CLK4Q9HAZ1 481 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-231ENST00000584063 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms