RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 EPAS1Q99814 870 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 CATSPERBQ9H7T0 1116 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 PREBQ9HCU5 417 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 ATP13A1Q9HD20 1204 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 TM9SF3Q9HD45 589 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 SARDHQ9UL12 918 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 LUC7L2Q9Y383 392 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
SKA2-208ENST00000583927 GOLGA4Q13439 2230 aaKnown RBP10.11□□□□□ -0.79
SKA2-208ENST00000583927 MAP1BP46821 2468 aaKnown RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 AKAP13Q12802 2813 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 CBX4O00257 560 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 SMAD6O43541 496 aaKnown RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 DFNA5O60443 496 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 RAMP2O60895 175 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 RNF8O76064 485 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 GYPCP04921 128 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 CTSLP07711 333 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 CD59P13987 128 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 GLDCP23378 1020 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 PMLP29590 882 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 CHRNA3P32297 505 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 PCK1P35558 622 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 MAPK8P45983 427 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 SHC2P98077 582 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 BNC1Q01954 994 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 ZNF252P-AS1Q0IIN9 211 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 PARP15Q460N3 678 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 AGBL4Q5VU57 503 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 ZSCAN30Q86W11 494 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 UMODL1-AS1Q8N2C9 162 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 OR14C36Q8NHC7 312 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 GANCQ8TET4 914 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 LRIG1Q96JA1 1093 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 HDAC8Q9BY41 377 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 MAGEB5Q9BZ81 275 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 MIR1-1HGQ9H1L0 117 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 SLC32A1Q9H598 525 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 NOL6Q9H6R4 1146 aaKnown RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 CNOT8Q9UFF9 292 aaKnown RBP10.1□□□□□ -0.79
SKA2-208ENST00000583927 HPCAL4Q9UM19 191 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 DMTF1Q9Y222 760 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.1□□□□□ -0.79
SKA2-208ENST00000583927 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
SKA2-208ENST00000583927 FREM2Q5SZK8 3169 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 TMCO5BA8MYB1 307 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 K7ERQ8 282 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 VILLO15195 856 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 CBFA2T2O43439 604 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 KDELR3O43731 214 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 RNGTTO60942 597 aaKnown RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 FSBPO95073 299 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 GSRP00390 522 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 SKILP12757 684 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 PSMA2P25787 234 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 EPHB2P29323 1055 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ACVRL1P37023 503 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 CTSKP43235 329 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 RECQLP46063 649 aaPredicted RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 HCAR3P49019 387 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 NOVA1P51513 510 aaKnown RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 NDST2P52849 883 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 CNTN1Q12860 1018 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 OVGP1Q12889 678 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 TRIM14Q14142 442 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 PIP5KL1Q5T9C9 394 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 N4BP2L1Q5TBK1 243 aaPredicted RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 SCYL2Q6P3W7 929 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 LINGO4Q6UY18 593 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 DPY19L3Q6ZPD9 716 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 CYP4V2Q6ZWL3 525 aaPredicted RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 IQCHQ86VS3 1027 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 PYROXD2Q8N2H3 581 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 SNX19Q92543 992 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 PPP1R16AQ96I34 528 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 HEPHQ9BQS7 1158 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 SPON2Q9BUD6 331 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
SKA2-208ENST00000583927 EBF2Q9HAK2 575 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ARHGAP20Q9P2F6 1191 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 IL36AQ9UHA7 158 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 AP4E1Q9UPM8 1137 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 ANKRD6Q9Y2G4 727 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 WASF2Q9Y6W5 498 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 PLXNB3Q9ULL4 1909 aa10.09□□□□□ -0.79
SKA2-208ENST00000583927 KMT2BQ9UMN6 2715 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms