RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 GPD2P43304 727 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 RPL34P49207 117 aaKnown RBP12.59□□□□□ -0.39
TOP3A-215ENST00000583328 YWHAZP63104 245 aaKnown RBP12.59□□□□□ -0.39
TOP3A-215ENST00000583328 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-215ENST00000583328 KRT83P78385 493 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 CDK17Q00537 523 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 CENPCQ03188 943 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 PNOCQ13519 176 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 FZD2Q14332 565 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 DEFB133Q30KQ1 61 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 COLEC12Q5KU26 742 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 ATG14Q6ZNE5 492 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 USP53Q70EK8 1073 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 PARGQ86W56 976 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 PPM1KQ8N3J5 372 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 OR52K2Q8NGK3 314 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 GLMNQ92990 594 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 KAT5Q92993 513 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 FEM1CQ96JP0 617 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 MED15Q96RN5 788 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 IL12RB2Q99665 862 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 SLC17A9Q9BYT1 436 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 SYNDIG1Q9H7V2 258 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 FAM204AQ9H8W3 233 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 COX16Q9P0S2 106 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-215ENST00000583328 OR51B4Q9Y5P0 310 aa12.59□□□□□ -0.39
TOP3A-215ENST00000583328 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 POM121BA6NF01 834 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 TPP1O14773 563 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 EFSO43281 561 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 SMC2O95347 1197 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 MT-CO1P00395 513 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 IGLV3-25P01717 112 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 JUNDP17535 347 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 CCR1P32246 355 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 RABIFP47224 123 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 RPIAP49247 311 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 NFKB2Q00653 900 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 AUHQ13825 339 aaKnown RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 DRAP1Q14919 205 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 LINC00303Q3SY05 128 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 PERM1Q5SV97 790 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 DENND1BQ6P3S1 775 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 KYAT3Q6YP21 454 aaKnown RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 RRAGAQ7L523 313 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 LURAP1LQ8IV03 231 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 CHST14Q8NCH0 376 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 OR2A12Q8NGT7 310 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 WDR48Q8TAF3 677 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 SLC35C1Q96A29 364 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 PPP1R16AQ96I34 528 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 HDAC8Q9BY41 377 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 KLF15Q9UIH9 416 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 ATXN7L1Q9ULK2 861 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 VANGL2Q9ULK5 521 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 HS3ST2Q9Y278 367 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 TDRD6O60522 2096 aaKnown RBP12.58□□□□□ -0.4
TOP3A-215ENST00000583328 PIEZO2Q9H5I5 2752 aa12.58□□□□□ -0.4
TOP3A-215ENST00000583328 DOCK9Q9BZ29 2069 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 E5RJQ4 531 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 K7ERQ8 282 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 TERTO14746 1132 aaKnown RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SNAP91O60641 907 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 CLDN11O75508 207 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 PTMSP20962 102 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 RRM1P23921 792 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 RECQLP46063 649 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 FMO5P49326 533 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 IRAK1P51617 712 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SGCGQ13326 291 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 EIF4EBP2Q13542 120 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SPIDRQ14159 915 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 FGL2Q14314 439 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 TMEM259Q4ZIN3 620 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 KIAA1161Q6NSJ0 714 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 JAMLQ86YT9 394 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 GRIN3AQ8TCU5 1115 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 GPT2Q8TD30 523 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 EXTL1Q92935 676 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 NAT6Q93015 286 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SGF29Q96ES7 293 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 C2orf49Q9BVC5 232 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms