RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
SNX11-212ENST00000583320 SPOCD1Q6ZMY3 1216 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 SND1Q7KZF4 910 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX11-212ENST00000583320 DDX42Q86XP3 938 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX11-212ENST00000583320 MAP7D3Q8IWC1 876 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
SNX11-212ENST00000583320 RNF139Q8WU17 664 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 RAPGEF5Q92565 580 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 CDK5RAP1Q96SZ6 601 aaKnown RBP18.35■□□□□ 0.53
SNX11-212ENST00000583320 OSBPL8Q9BZF1 889 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 GAREM1Q9H706 876 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 NMUR1Q9HB89 426 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 SPHK2Q9NRA0 654 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 GMIPQ9P107 970 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 BTBD3Q9Y2F9 522 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 CABIN1Q9Y6J0 2220 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 MGAQ8IWI9 3026 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 MYO18BQ8IUG5 2567 aa18.35■□□□□ 0.53
SNX11-212ENST00000583320 LRRD1A4D1F6 860 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 WASH3PC4AMC7 463 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 KRIT1O00522 736 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 GNSP15586 552 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 CDKN2BP42772 138 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 CXCR3P49682 368 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 C19orf57Q0VDD7 668 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 NNTQ13423 1086 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 DPYSL2Q16555 572 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 TFDP3Q5H9I0 405 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 GRAMD4Q6IC98 578 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 MFSD7Q6UXD7 560 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 CCDC50Q8IVM0 306 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 KCTD6Q8NC69 237 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 LRRN4CLQ8ND94 238 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 DNASE2BQ8WZ79 361 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 UBXN4Q92575 508 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 EDEM1Q92611 657 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 RNF25Q96BH1 459 aaPredicted RBP18.34■□□□□ 0.53
SNX11-212ENST00000583320 OTUB2Q96DC9 234 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 UBL7Q96S82 380 aaPredicted RBP18.34■□□□□ 0.53
SNX11-212ENST00000583320 SNRNP25Q9BV90 132 aaKnown RBP18.34■□□□□ 0.53
SNX11-212ENST00000583320 ZDHHC5Q9C0B5 715 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 CCSER2Q9H7U1 834 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 FAM204AQ9H8W3 233 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 TM7SF3Q9NS93 570 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 SMARCAL1Q9NZC9 954 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 SLCO1B1Q9Y6L6 691 aa18.34■□□□□ 0.53
SNX11-212ENST00000583320 MUC22E2RYF6 1773 aaPredicted RBP18.33■□□□□ 0.53
SNX11-212ENST00000583320 ATMQ13315 3056 aa18.33■□□□□ 0.53
SNX11-212ENST00000583320 hCG_1818297A0A087WSY0 165 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 A0A1B0GTW7 788 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 C3orf70A6NLC5 250 aaPredicted RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 MEI4A8MW99 385 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 IRAK2O43187 625 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 TJP3O95049 919 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 IRF1P10914 325 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 ZNF135P52742 658 aaPredicted RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 PITX1P78337 314 aaPredicted RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 KLF1Q13351 362 aaPredicted RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 CYP1B1Q16678 543 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 ARL13BQ3SXY8 428 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 RAB6CQ53S08 254 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 BRMS1LQ5PSV4 323 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 AADACL2Q6P093 401 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 TADA2BQ86TJ2 420 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 TAC4Q86UU9 113 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 PIP4K2CQ8TBX8 421 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 FOXJ1Q92949 421 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 P2RY11Q96G91 374 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 TOE1Q96GM8 510 aaKnown RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 SERPINB11Q96P15 392 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 RAB6CQ9H0N0 254 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 MIR1-1HGQ9H1L0 117 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 DNAJC17Q9NVM6 304 aaKnown RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNX11-212ENST00000583320 DDIT4Q9NX09 232 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 RCOR3Q9P2K3 495 aaPredicted RBP18.33■□□□□ 0.52
SNX11-212ENST00000583320 FZD10Q9ULW2 581 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 SH3BP1Q9Y3L3 701 aa18.33■□□□□ 0.52
SNX11-212ENST00000583320 GREM1O60565 184 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 RARGP13631 454 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 ITPKBP27987 946 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 CD6P30203 668 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 ADRA1BP35368 520 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 PGFP49763 221 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 SMTNL2Q2TAL5 461 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 HLA-BQ31612 363 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 GLE1Q53GS7 698 aaKnown RBP18.32■□□□□ 0.52
SNX11-212ENST00000583320 KCNT1Q5JUK3 1230 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 CCDC70Q6NSX1 233 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 SLC39A7Q92504 469 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 HSPH1Q92598 858 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 RUNDC3BQ96NL0 473 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 DCBLD2Q96PD2 775 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 ZNF670Q9BS34 389 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 GPR174Q9BXC1 333 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms