RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 GALNT7Q86SF2 657 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 SERPINA11Q86U17 422 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 WDR5BQ86VZ2 330 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 PALB2Q86YC2 1186 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 ZDHHC23Q8IYP9 409 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 OR14A16Q8NHC5 309 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 STT3BQ8TCJ2 826 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 DDX23Q9BUQ8 820 aaKnown RBP4.33□□□□□ -1.72
COPS3-217ENST00000583160 THAP1Q9NVV9 213 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 SEL1LQ9UBV2 794 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 OSGIN2Q9Y236 505 aa4.33□□□□□ -1.72
COPS3-217ENST00000583160 DDTLA6NHG4 134 aaPredicted RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 H0Y3Z8 333 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 CSTBP04080 98 aaKnown RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 FCGR1AP12314 374 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 ACP5P13686 325 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 NAGAP17050 411 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 NUDT6P53370 316 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 GAS1P54826 345 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 PLCB4Q15147 1175 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 ATG9BQ674R7 924 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 TANGO2Q6ICL3 276 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 C8orf82Q6P1X6 216 aaPredicted RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 C1orf228Q6PIY5 440 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 MON1BQ7L1V2 547 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 SYT13Q7L8C5 426 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 TRIM74Q86UV6 250 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 TRIM73Q86UV7 250 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 NR2C2APQ86WQ0 139 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 BRSK2Q8IWQ3 736 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 SCAIQ8N9R8 606 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 FSIP1Q8NA03 581 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 TEFMQ96QE5 360 aaKnown RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
COPS3-217ENST00000583160 SRPRBQ9Y5M8 271 aaKnown RBP4.32□□□□□ -1.72
COPS3-217ENST00000583160 TARSL2A2RTX5 802 aaKnown RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 BTBD18B2RXH4 712 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 E7EVH7 732 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 EYA2O00167 538 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 KRT38O76015 456 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 SOX30O94993 753 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 CLDN7O95471 211 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 ZBTB11O95625 1053 aaPredicted RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 ARSAP15289 507 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 ITGB8P26012 769 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 SKIV2L2P42285 1042 aaKnown RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 DPP6P42658 865 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 AMTP48728 403 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 COMPP49747 757 aaPredicted RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 KIF5AQ12840 1032 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 TRAF3Q13114 568 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 CREB3L2Q70SY1 520 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 C16orf82Q7Z2V1 217 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 FJX1Q86VR8 437 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 MYLK4Q86YV6 388 aaPredicted RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 CCDC146Q8IYE0 955 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 TEX45Q8NA69 505 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 MIGA1Q8NAN2 632 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 TMEM163Q8TC26 289 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 TAF1DQ9H5J8 278 aaPredicted RBP4.31□□□□□ -1.72
COPS3-217ENST00000583160 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 PLSCR4Q9NRQ2 329 aa4.31□□□□□ -1.72
COPS3-217ENST00000583160 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 F5H423 210 aaPredicted RBP4.3□□□□□ -1.72
COPS3-217ENST00000583160 ITM2AO43736 263 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 STRNO43815 780 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 ZNF12P17014 697 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 MT3P25713 68 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 CLCN5P51795 746 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 HDAC1Q13547 482 aaPredicted RBP4.3□□□□□ -1.72
COPS3-217ENST00000583160 BLMHQ13867 455 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 SMAD1Q15797 465 aaKnown RBP4.3□□□□□ -1.72
COPS3-217ENST00000583160 CCDC38Q502W7 563 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 RUNDC3AQ59EK9 446 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 RASGRP2Q7LDG7 609 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 ARMC9Q7Z3E5 817 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 CACNA2D3Q8IZS8 1091 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 OR6Y1Q8NGX8 325 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 TMED6Q8WW62 240 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 DNASE2BQ8WZ79 361 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 HERC2P3Q9BVR0 1158 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 LHPPQ9H008 270 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 DHDHQ9UQ10 334 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 ABCC9O60706 1549 aa4.3□□□□□ -1.72
COPS3-217ENST00000583160 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 SEPT4O43236 478 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 KIF1CO43896 1103 aaKnown RBP4.29□□□□□ -1.72
COPS3-217ENST00000583160 KCNJ13O60928 360 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 CBX6O95503 412 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
COPS3-217ENST00000583160 MMP3P08254 477 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 CSF1P09603 554 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 PNPLA4P41247 253 aa4.29□□□□□ -1.72
COPS3-217ENST00000583160 RBM5P52756 815 aaKnown RBP eCLIP4.29□□□□□ -1.72
COPS3-217ENST00000583160 MVDP53602 400 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms