RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 HMCESQ96FZ2 354 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 C6orf106Q9H6K1 298 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 NOL6Q9H6R4 1146 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
SMARCE1-218ENST00000582955 TNRC6BQ9UPQ9 1833 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 ZSCAN5CA6NGD5 496 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 GDF9O60383 454 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 PROSCO94903 275 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 FSBPO95073 299 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 ERCC2P18074 760 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CHRNA3P32297 505 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 HOXD12P35452 270 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 ZNF135P52742 658 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 METAP1P53582 386 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 SLC25A11Q02978 314 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 KRT81Q14533 505 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 TRIM61Q5EBN2 209 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 TXNRD3NBQ6F5E7 133 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 UMODL1-AS1Q8N2C9 162 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CEP76Q8TAP6 659 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 GRIN3AQ8TCU5 1115 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 NUSAP1Q9BXS6 441 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 TM6SF2Q9BZW4 377 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 OSGEPQ9NPF4 335 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 RXFP3Q9NSD7 469 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 PPM1HQ9ULR3 514 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
SMARCE1-218ENST00000582955 CXorf51AA0A1B0GTR3 108 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 LRRC72A6NJI9 287 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 PLK4O00444 970 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 CD160O95971 181 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 PRNPP04156 253 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 CTSLP07711 333 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 GNSP15586 552 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 DRD3P35462 400 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 ID4P47928 161 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 HCAR3P49019 387 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 NDST2P52849 883 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 IRX4P78413 519 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 SERINC3Q13530 473 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 MESDQ14696 234 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 DUOXA1Q1HG43 343 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 PEAR1Q5VY43 1037 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 NCEH1Q6PIU2 408 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 DPY19L3Q6ZPD9 716 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 CPNE8Q86YQ8 564 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 RHOT2Q8IXI1 618 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 OR14C36Q8NHC7 312 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 NETO1Q8TDF5 533 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 RMDN1Q96DB5 314 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 PANX2Q96RD6 677 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 EDEM2Q9BV94 578 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 LRRC19Q9H756 370 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 PCDH18Q9HCL0 1135 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 EVLQ9UI08 416 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 EIF2B4Q9UI10 523 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
SMARCE1-218ENST00000582955 CHD5Q8TDI0 1954 aa12.83□□□□□ -0.35
SMARCE1-218ENST00000582955 LNP1A1A4G5 178 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ARHGAP42A6NI28 874 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 DFFAO00273 331 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ZNF821O75541 412 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 TMCC1O94876 653 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 SDHBP21912 280 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 AMPD1P23109 780 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 MAGEA1P43355 309 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 ADPRHP54922 357 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 CDH6P55285 790 aa12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-218ENST00000582955 CNTN1Q12860 1018 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms