RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PSKH2Q96QS6 385 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 EPB41L5Q9HCM4 733 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 SLC2A4RGQ9NR83 387 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 FAM114A2Q9NRY5 505 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 RBM22Q9NW64 420 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC57-216ENST00000582885 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 WHRNQ9P202 907 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 KLHL8Q9P2G9 620 aaPredicted RBP12.23□□□□□ -0.45
CCDC57-216ENST00000582885 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 SEPT3Q9UH03 358 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 HS3ST2Q9Y278 367 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 ATP8A1Q9Y2Q0 1164 aa12.23□□□□□ -0.45
CCDC57-216ENST00000582885 ATG2BQ96BY7 2078 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 SMAPO00193 183 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 DNALI1O14645 258 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 SNAP91O60641 907 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 SRPRAP08240 638 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 POLR2EP19388 210 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 CES1P23141 567 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 MAGEA6P43360 314 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 RPL21P46778 160 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 SLC6A11P48066 632 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 NRLP54845 237 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 MRPS25P82663 173 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 PFKPQ01813 784 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 GUCY2DQ02846 1103 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 CAV1Q03135 178 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 NSUN2Q08J23 767 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 GPS1Q13098 491 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 TDGQ13569 410 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 CUL1Q13616 776 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 E2F5Q15329 346 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 TRIP13Q15645 432 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 GEN1Q17RS7 908 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 MBLAC2Q68D91 279 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 KLHDC8BQ8IXV7 354 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 KDM1BQ8NB78 822 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 EXOC4Q96A65 974 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 ISG20Q96AZ6 181 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 CHFRQ96EP1 664 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 MSANTD3Q96H12 275 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 FCRL5Q96RD9 977 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 PNKPQ96T60 521 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 GBA3Q9H227 469 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
CCDC57-216ENST00000582885 TPX2Q9ULW0 747 aaKnown RBP12.22□□□□□ -0.45
CCDC57-216ENST00000582885 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 PSMD3O43242 534 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 NEBLO76041 1014 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 METTL18O95568 372 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 HLA-DQB2P05538 268 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 ATP5BP06576 529 aaKnown RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SRFP11831 508 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 CD68P34810 354 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 GRIA2P42262 883 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SERPINH1P50454 418 aaKnown RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 CDK16Q00536 496 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 CALCOCO2Q13137 446 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SEMA5AQ13591 1074 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 ZNF235Q14590 738 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 CYTH1Q15438 398 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SLC14A2Q15849 920 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 RALGPS1Q5JS13 557 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 TMEM215Q68D42 235 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 PRUNE1Q86TP1 453 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 HOOK3Q86VS8 718 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 TERB1Q8NA31 727 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 AGAP3Q96P47 875 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 MGME1Q9BQP7 344 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 CEP44Q9C0F1 390 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SLC25A51Q9H1U9 297 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 GLOD4Q9HC38 313 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 RAB6BQ9NRW1 208 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 GRHL1Q9NZI5 618 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 RAB21Q9UL25 225 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 ERVW-1Q9UQF0 538 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 SNX24Q9Y343 169 aa12.21□□□□□ -0.45
CCDC57-216ENST00000582885 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 V9GYY5 206 aaPredicted RBP12.21□□□□□ -0.45
CCDC57-216ENST00000582885 MYLKQ15746 1914 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 TRIM24O15164 1050 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 TP73O15350 636 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 ANXA9O76027 345 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 TMCC1O94876 653 aa12.2□□□□□ -0.46
CCDC57-216ENST00000582885 DLDP09622 509 aaKnown RBP12.2□□□□□ -0.46
CCDC57-216ENST00000582885 NFKB1P19838 968 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms