RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 RTN2O75298 545 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 MT-CO1P00395 513 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 CD59P13987 128 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 DRD3P35462 400 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 SNRPD1P62314 119 aaKnown RBP20.55■□□□□ 0.88
SMG8-204ENST00000580498 RAD51Q06609 339 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 CNTN1Q12860 1018 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 KIF19Q2TAC6 998 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 POM121L1PQ3SYA9 428 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 MANEALQ5VSG8 457 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 NAPEPLDQ6IQ20 393 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 NEK5Q6P3R8 708 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 LUZP1Q86V48 1076 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 OXR1Q8N573 874 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 OR2A12Q8NGT7 310 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
SMG8-204ENST00000580498 CDC6Q99741 560 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 HEPHQ9BQS7 1158 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 GDF3Q9NR23 364 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 APOBEC2Q9Y235 224 aaKnown RBP20.55■□□□□ 0.88
SMG8-204ENST00000580498 LAMA1P25391 3075 aa20.55■□□□□ 0.88
SMG8-204ENST00000580498 A0A1W2PQJ5 194 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 SH3BP5O60239 455 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 GJB3O75712 270 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 FTLP02792 175 aaPredicted RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 YBEYP58557 167 aaPredicted RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 TPI1P60174 286 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 RPL7AP62424 266 aaKnown RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 OVGP1Q12889 678 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 STAT4Q14765 748 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 TRIP6Q15654 476 aaKnown RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 CARD16Q5EG05 197 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 TRIM69Q86WT6 500 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 RTL3Q8N8U3 475 aaKnown RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 GRIN3AQ8TCU5 1115 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 CASKIN2Q8WXE0 1202 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 ISG20Q96AZ6 181 aaKnown RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 LRIG1Q96JA1 1093 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 SLC6A18Q96N87 628 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMG8-204ENST00000580498 TNKS2Q9H2K2 1166 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 CNOT8Q9UFF9 292 aaKnown RBP20.54■□□□□ 0.88
SMG8-204ENST00000580498 SNX11Q9Y5W9 270 aa20.54■□□□□ 0.88
SMG8-204ENST00000580498 PCNX2A6NKB5 2137 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 K7ERQ8 282 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 DAPK3O43293 454 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 PRPSAP2O60256 369 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 RNGTTO60942 597 aaKnown RBP20.53■□□□□ 0.88
SMG8-204ENST00000580498 ARRB1P49407 418 aaPredicted RBP20.53■□□□□ 0.88
SMG8-204ENST00000580498 NEK3P51956 506 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 MAMLD1Q13495 774 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 ARSIQ5FYB1 569 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 PPP1R15BQ5SWA1 713 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 FBXL19Q6PCT2 694 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 ERN2Q76MJ5 926 aaKnown RBP20.53■□□□□ 0.88
SMG8-204ENST00000580498 ZSCAN30Q86W11 494 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 NLRP14Q86W24 1093 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 PLPP6Q8IY26 295 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 RHBDD1Q8TEB9 315 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 SYN2Q92777 582 aaPredicted RBP20.53■□□□□ 0.88
SMG8-204ENST00000580498 ARHGEF2Q92974 986 aaKnown RBP20.53■□□□□ 0.88
SMG8-204ENST00000580498 ZNF212Q9UDV6 495 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 SARDHQ9UL12 918 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 FZD10Q9ULW2 581 aa20.53■□□□□ 0.88
SMG8-204ENST00000580498 SPAARA0A1B0GVQ0 90 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 TCRBV5S1A1TA0A578 114 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 PRAMEF26H0Y7S4 382 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 SMAD6O43541 496 aaKnown RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 LATO43561 262 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 BUB1O43683 1085 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 PCDH8O95206 1070 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 GLDCP23378 1020 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 CTSKP43235 329 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 GRK6P43250 576 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 ZNF135P52742 658 aaPredicted RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 PARP15Q460N3 678 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 AGBL4Q5VU57 503 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 PLEKHA7Q6IQ23 1121 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 DPY19L3Q6ZPD9 716 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 ZNF571Q7Z3V5 609 aaPredicted RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 FNIP1Q8TF40 1166 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 FAM131CQ96AQ9 280 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 ARHGEF26Q96DR7 871 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 OSBPL1AQ9BXW6 950 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 HDAC8Q9BY41 377 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 ZDHHC6Q9H6R6 413 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 TAS2R14Q9NYV8 317 aa20.52■□□□□ 0.88
SMG8-204ENST00000580498 HECAQ9UBI9 543 aaPredicted RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 FNDC3AQ9Y2H6 1198 aaKnown RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 LUC7L2Q9Y383 392 aaKnown RBP20.52■□□□□ 0.88
SMG8-204ENST00000580498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMG8-204ENST00000580498 FAM72CH0Y354 149 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 CBFA2T2O43439 604 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 KDELR3O43731 214 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 LEFTY1O75610 366 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 ZMPSTE24O75844 475 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 GSRP00390 522 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 TPM1P09493 284 aa20.51■□□□□ 0.87
SMG8-204ENST00000580498 MAT2AP31153 395 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms