RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 TGIF1Q15583 401 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 DEFB133Q30KQ1 61 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 CBWD6Q4V339 395 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 ZC3H12AQ5D1E8 599 aaKnown RBP8.91□□□□□ -0.98
BRIP1-204ENST00000579028 CBWD3Q5JTY5 395 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 CBWD5Q5RIA9 395 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 SYPL2Q5VXT5 272 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 ERICH6BQ5W0A0 696 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 CLEC18BQ6UXF7 455 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 ERN2Q76MJ5 926 aaKnown RBP8.91□□□□□ -0.98
BRIP1-204ENST00000579028 SLC35F3Q8IY50 421 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 GUF1Q8N442 669 aaKnown RBP8.91□□□□□ -0.98
BRIP1-204ENST00000579028 ATP6V0D2Q8N8Y2 350 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 CLEC18CQ8NCF0 446 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 TMIEQ8NEW7 156 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 OR2A12Q8NGT7 310 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 IL12RB2Q99665 862 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 ZSWIM1Q9BR11 485 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 FEM1AQ9BSK4 669 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 HDAC8Q9BY41 377 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 MIS12Q9H081 205 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRIP1-204ENST00000579028 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 HS3ST2Q9Y278 367 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 TRPM6Q9BX84 2022 aa8.91□□□□□ -0.98
BRIP1-204ENST00000579028 SCN8AQ9UQD0 1980 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 KCNU1A8MYU2 1149 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 M0QYV0 167 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 RNF103O00237 685 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 CASC3O15234 703 aaKnown RBP8.9□□□□□ -0.98
BRIP1-204ENST00000579028 RAD51BO15315 384 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 BNIP3LO60238 219 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 PRNPP04156 253 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 LIPCP11150 499 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 JUNDP17535 347 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 TBXAS1P24557 533 aaPredicted RBP8.9□□□□□ -0.98
BRIP1-204ENST00000579028 UGT1A5P35504 534 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 ME1P48163 572 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 EIF2B5Q13144 721 aaKnown RBP8.9□□□□□ -0.98
BRIP1-204ENST00000579028 TBR1Q16650 682 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 EDRF1Q3B7T1 1238 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 RABGAP1LQ5R372 815 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 KIAA1161Q6NSJ0 714 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 FBXL22Q6P050 247 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 RAB11FIP2Q7L804 512 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 ZSCAN30Q86W11 494 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 LMX1AQ8TE12 382 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 BTN2A2Q8WVV5 523 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 GLMNQ92990 594 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 RNF34Q969K3 372 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 TBATAQ96M53 351 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 CCDC114Q96M63 670 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 CCDC3Q9BQI4 270 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 TRIM62Q9BVG3 475 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 SLC17A9Q9BYT1 436 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 SLC25A18Q9H1K4 315 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 UPF2Q9HAU5 1272 aaKnown RBP8.9□□□□□ -0.98
BRIP1-204ENST00000579028 DYRK4Q9NR20 520 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 GEMIN8Q9NWZ8 242 aaKnown RBP8.9□□□□□ -0.98
BRIP1-204ENST00000579028 SPASTQ9UBP0 616 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 USP25Q9UHP3 1055 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 SLC12A6Q9UHW9 1150 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 VPS28Q9UK41 221 aa8.9□□□□□ -0.98
BRIP1-204ENST00000579028 PTPN13Q12923 2485 aa8.9□□□□□ -0.99
BRIP1-204ENST00000579028 LMO7DNF2Z398 122 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 TMX2-CTNND1H3BSU7 103 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 RNF225M0QZC1 329 aaPredicted RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 NVLO15381 856 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 SPINT1O43278 529 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 GCATO75600 419 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 PAK4O96013 591 aaPredicted RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 MT-CO1P00395 513 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 EPB41P11171 864 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 ACADSBP45954 432 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 IRAK1P51617 712 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 NEK3P51956 506 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 PFN3P60673 137 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 RPS21P63220 83 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 CENPCQ03188 943 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 SERINC3Q13530 473 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 PDE1CQ14123 709 aaPredicted RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 TPRG1LQ5T0D9 272 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 TMEM270Q6UE05 265 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 B3GNT8Q7Z7M8 397 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 RBFAQ8N0V3 343 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 PPP1R16AQ96I34 528 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 LENG8Q96PV6 779 aaPredicted RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 PSMB7Q99436 277 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 KLF6Q99612 283 aaPredicted RBP8.89□□□□□ -0.99
BRIP1-204ENST00000579028 FUCA2Q9BTY2 467 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 ADNPQ9H2P0 1102 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 EPB41L5Q9HCM4 733 aa8.89□□□□□ -0.99
BRIP1-204ENST00000579028 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms