RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SLC20A2Q08357 652 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PPIDQ08752 370 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SIM2Q14190 667 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 POLD3Q15054 466 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PDK1Q15118 436 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 OASLQ15646 514 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCDC6Q16204 474 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ANO4Q32M45 955 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KAZNQ674X7 775 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RALGPS2Q86X27 583 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MFN1Q8IWA4 741 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PRELID2Q8N945 189 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ACTL9Q8TC94 416 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 WFDC5Q8TCV5 224 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SLCO2A1Q92959 643 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ACDQ96AP0 544 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 IER2Q9BTL4 223 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GTSE1Q9NYZ3 720 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 STARD13Q9Y3M8 1113 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MFHAS1Q9Y4C4 1052 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MYOFQ9NZM1 2061 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 COL4A2P08572 1712 aa11.38□□□□□ -0.59
CDK5RAP3-204ENST00000577664 A0A0D9SEW6 157 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZSCAN5CA6NGD5 496 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ARHGAP42A6NI28 874 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SHISA7A6NL88 538 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RASA4BC9J798 803 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RASA4O43374 803 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LIASO43766 372 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MFSD11O43934 449 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TULP3O75386 442 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PEX11BO96011 259 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ITGAVP06756 1048 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PECAM1P16284 738 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 OTUD4Q01804 1114 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SULT2A1Q06520 285 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 IL10RBQ08334 325 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LMAN2Q12907 356 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FOXC1Q12948 553 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CDH18Q13634 790 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RFTN1Q14699 578 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PRKD1Q15139 912 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 INO80DQ53TQ3 878 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TFAP2DQ7Z6R9 452 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ADIPOR2Q86V24 386 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CIR1Q86X95 450 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CARNMT1Q8N4J0 409 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TEX26Q8N6G2 289 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KDM1BQ8NB78 822 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SPATA4Q8NEY3 305 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 WFIKKN2Q8TEU8 576 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MAML1Q92585 1016 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RTP4Q96DX8 246 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZNF599Q96NL3 588 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PLK2Q9NYY3 685 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DEC1Q9P2X7 70 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SAE1Q9UBE0 346 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PCYOX1Q9UHG3 505 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 AMACRQ9UHK6 382 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FEZ2Q9UHY8 353 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 INTS6Q9UL03 887 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TENM4Q6N022 2769 aa11.37□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KRIT1O00522 736 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PPP1R12AO14974 1030 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MATN3O15232 486 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MTSS1O43312 755 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HRO43593 1189 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PRAMEF11O60813 436 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CD160O95971 181 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TOP3BO95985 862 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RHOCP08134 193 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PABPC1P11940 636 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MZF1P28698 734 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CHRNA3P32297 505 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TNFRSF4P43489 277 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SLC6A11P48066 632 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FNTAP49354 379 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DGKGP49619 791 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CKAP4Q07065 602 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HNRNPDQ14103 355 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 E2F5Q15329 346 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LLGL1Q15334 1064 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SF3A2Q15428 464 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PLEKHG6Q3KR16 790 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SLC45A4Q5BKX6 768 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RNF219Q5W0B1 726 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TMEM215Q68D42 235 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms