RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 TMPRSS6Q8IU80 811 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
NDE1-212ENST00000577101 RNF10Q8N5U6 811 aaKnown RBP9.97□□□□□ -0.81
NDE1-212ENST00000577101 AADATQ8N5Z0 425 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 ATP11CQ8NB49 1132 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 CCDC26Q8TAB7 109 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 FAM131CQ96AQ9 280 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 ARRDC3Q96B67 414 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 OLFM3Q96PB7 478 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 KCNH6Q9H252 994 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
NDE1-212ENST00000577101 ZSCAN32Q9NX65 697 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 DDX56Q9NY93 547 aaKnown RBP9.97□□□□□ -0.81
NDE1-212ENST00000577101 SLC25A13Q9UJS0 675 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.97□□□□□ -0.81
NDE1-212ENST00000577101 WASF2Q9Y6W5 498 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 SPAG17Q6Q759 2223 aa9.97□□□□□ -0.81
NDE1-212ENST00000577101 IGHV1OR15-9A0A0B4J2B8 117 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 CCDC163A0A0D9SF12 145 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 TCRBV7S2A1N4TA0A589 114 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 MCF2LO15068 1137 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 MID1O15344 667 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 KRT86O43790 486 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 IGLV3-19P01714 112 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 GARSP41250 739 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 NBL1P41271 181 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 NAP1L1P55209 391 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 NHLH1Q02575 133 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 IL10RBQ08334 325 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 ACCSLQ4AC99 568 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 MEI1Q5TIA1 1274 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 MMAAQ8IVH4 418 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 LZTR1Q8N653 840 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 SUMF1Q8NBK3 374 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 TSEN2Q8NCE0 465 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 OR6K2Q8NGY2 324 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 EXD1Q8NHP7 514 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 EXOC2Q96KP1 924 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 TLR10Q9BXR5 811 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 TM6SF2Q9BZW4 377 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 ITM2CQ9NQX7 267 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 TRMT1Q9NXH9 659 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 SUN2Q9UH99 717 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 IPO11Q9UI26 975 aaKnown RBP9.96□□□□□ -0.82
NDE1-212ENST00000577101 AMFRQ9UKV5 643 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
NDE1-212ENST00000577101 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 VPS13AQ96RL7 3174 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 CCDC66A2RUB6 948 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ARHGAP42A6NI28 874 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 SPINT1O43278 529 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 CST8O60676 142 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ZRANB2O95218 330 aaKnown RBP eCLIP9.95□□□□□ -0.82
NDE1-212ENST00000577101 CR2P20023 1033 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 PTPN7P35236 360 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ETFBP38117 255 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 TPMTP51580 245 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 CLCN6P51797 869 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 CCNHP51946 323 aaPredicted RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 PTPN5P54829 565 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 NRLP54845 237 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ST8SIA6P61647 398 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 DYNLT1P63172 113 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 SLC20A2Q08357 652 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 KLF1Q13351 362 aaPredicted RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 CST6Q15828 149 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 PPP2R5EQ16537 467 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 POM121L1PQ3SYA9 428 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 INO80DQ53TQ3 878 aaPredicted RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 CARD16Q5EG05 197 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 TFDP3Q5H9I0 405 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 KAZNQ674X7 775 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 SDE2Q6IQ49 451 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 RETSATQ6NUM9 610 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 KIAA1324Q6UXG2 1013 aaKnown RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 PEX26Q7Z412 305 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 KBTBD6Q86V97 674 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ZSWIM9Q86XI8 627 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 RFX6Q8HWS3 928 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 MAP7D3Q8IWC1 876 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 RCOR2Q8IZ40 523 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 C17orf53Q8N3J3 647 aaPredicted RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 PCDH20Q8N6Y1 951 aaKnown RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 GAB3Q8WWW8 586 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 MAML1Q92585 1016 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 ISG20Q96AZ6 181 aaKnown RBP9.95□□□□□ -0.82
NDE1-212ENST00000577101 HDAC11Q96DB2 347 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 SIPA1Q96FS4 1042 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 LGMNQ99538 433 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 PRRX2Q99811 253 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 HEMGNQ9BXL5 484 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 TSGA10Q9BZW7 698 aa9.95□□□□□ -0.82
NDE1-212ENST00000577101 CEP44Q9C0F1 390 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms