RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 C7orf57Q8NEG2 295 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 GABPB2Q8TAK5 448 aaPredicted RBP5.66□□□□□ -1.5
NUP88-213ENST00000576862 SCLT1Q96NL6 688 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 CLSTN3Q9BQT9 956 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 WACQ9BTA9 647 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 POLDIP3Q9BY77 421 aaKnown RBP5.66□□□□□ -1.5
NUP88-213ENST00000576862 EBF3Q9H4W6 596 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 KLHL31Q9H511 634 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 GRHL1Q9NZI5 618 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 GDAQ9Y2T3 454 aa5.66□□□□□ -1.5
NUP88-213ENST00000576862 DDTLA6NHG4 134 aaPredicted RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 STMND1H3BQB6 276 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 I6L893 689 aaPredicted RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 HSPB6O14558 160 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 SPTLC2O15270 562 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 RNMTO43148 476 aaKnown RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 STRNO43815 780 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 CBX6O95503 412 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 SKIV2L2P42285 1042 aaKnown RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 RFX5P48382 616 aaPredicted RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 CLCNKBP51801 687 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 TRAF1Q13077 416 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 BBS12Q6ZW61 710 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 NPLQ9BXD5 320 aaPredicted RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 LMAN2LQ9H0V9 348 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 TTC12Q9H892 705 aaPredicted RBP5.65□□□□□ -1.5
NUP88-213ENST00000576862 DHDHQ9UQ10 334 aa5.65□□□□□ -1.5
NUP88-213ENST00000576862 BECN2A8MW95 431 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 PEX12O00623 359 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 INSIG1O15503 277 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 KCNAB3O43448 404 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 ARRB2P32121 409 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 DPP6P42658 865 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 PPP3CCP48454 512 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 GOLGA8FQ08AF8 430 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 FHL1Q13642 323 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 CYP26C1Q6V0L0 522 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 SERPINA11Q86U17 422 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 CAMK1DQ8IU85 385 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 SMC5Q8IY18 1101 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 ZDHHC23Q8IYP9 409 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 BICD2Q8TD16 824 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 STAMQ92783 540 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 UBXN10Q96LJ8 280 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 PSMD1Q99460 953 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 PHF7Q9BWX1 381 aaPredicted RBP5.64□□□□□ -1.51
NUP88-213ENST00000576862 PLAC1Q9HBJ0 212 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 ATP8A2Q9NTI2 1148 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 SAGE1Q9NXZ1 904 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 BCCIPQ9P287 314 aaKnown RBP eCLIP5.64□□□□□ -1.51
NUP88-213ENST00000576862 SEL1LQ9UBV2 794 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.64□□□□□ -1.51
NUP88-213ENST00000576862 FBXO40Q9UH90 709 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 CLDN16Q9Y5I7 305 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 RAI2Q9Y5P3 530 aa5.64□□□□□ -1.51
NUP88-213ENST00000576862 RPS10-NUDT3A0A1W2PQS6 291 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 C17orf102A2RUQ5 167 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 ANP32CO43423 234 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 HBP1O60381 514 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 CLDN7O95471 211 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 ADAP00813 363 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 LCATP04180 440 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 ALPLP05186 524 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 WEE2P0C1S8 567 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 ARSBP15848 533 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 AVPR1AP37288 418 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 RFX2P48378 723 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 CCT5P48643 541 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 SLC18A3Q16572 532 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 DCAF12L2Q5VW00 463 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 LRRTM4Q86VH4 590 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 SAMD14Q8IZD0 417 aaPredicted RBP5.63□□□□□ -1.51
NUP88-213ENST00000576862 OR4N2Q8NGD1 307 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 CEP76Q8TAP6 659 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 RBM38Q9H0Z9 239 aaKnown RBP5.63□□□□□ -1.51
NUP88-213ENST00000576862 KRCC1Q9NPI7 259 aaPredicted RBP5.63□□□□□ -1.51
NUP88-213ENST00000576862 TMEM160Q9NX00 188 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 INSL5Q9Y5Q6 135 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 CACNA1IQ9P0X4 2223 aa5.63□□□□□ -1.51
NUP88-213ENST00000576862 SH2D7A6NKC9 451 aaPredicted RBP5.62□□□□□ -1.51
NUP88-213ENST00000576862 FAM157AC9JC47 383 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 TSPAN3O60637 253 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 MYZAPP0CAP1 466 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 HTR6P50406 440 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 PGGT1BP53609 377 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 NANOS2P60321 138 aaKnown RBP5.62□□□□□ -1.51
NUP88-213ENST00000576862 UBE3AQ05086 875 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 CHRNDQ07001 517 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 GPR18Q14330 331 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 ZRSR2Q15696 482 aaKnown RBP5.62□□□□□ -1.51
NUP88-213ENST00000576862 ME3Q16798 604 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 WDR45BQ5MNZ6 344 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 UBAP2Q5T6F2 1119 aaKnown RBP5.62□□□□□ -1.51
NUP88-213ENST00000576862 HEPHL1Q6MZM0 1159 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 Q6ZTK2 550 aa5.62□□□□□ -1.51
NUP88-213ENST00000576862 LSM14AQ8ND56 463 aaKnown RBP5.62□□□□□ -1.51
NUP88-213ENST00000576862 B4GALNT2Q8NHY0 566 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms