RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 TTC39BQ5VTQ0 682 aaPredicted RBP11□□□□□ -0.65
CALCOCO2-228ENST00000576582 AGBL4Q5VU57 503 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 TMEM270Q6UE05 265 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 DCP2Q8IU60 420 aaKnown RBP11□□□□□ -0.65
CALCOCO2-228ENST00000576582 LMO3Q8TAP4 145 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 CLEC4CQ8WTT0 213 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 TTC9Q92623 222 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 MED8Q96G25 268 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 GSDMAQ96QA5 445 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 TSG101Q99816 390 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 MIS12Q9H081 205 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 FAM107BQ9H098 131 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11□□□□□ -0.65
CALCOCO2-228ENST00000576582 UCKL1Q9NWZ5 548 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 NLGN3Q9NZ94 848 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 NCKIPSDQ9NZQ3 722 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 SARDHQ9UL12 918 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 NAALADL1Q9UQQ1 740 aa11□□□□□ -0.65
CALCOCO2-228ENST00000576582 A0A1B0GVM2 712 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 KCNU1A8MYU2 1149 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 RNF225M0QZC1 329 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 SCAMP1O15126 338 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 SLC31A1O15431 190 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 P4HA2O15460 535 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 PIAS2O75928 621 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 CPP00450 1065 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 GIMD1P0DJR0 217 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 SLC2A3P11169 496 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 VAV1P15498 845 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 PDGFRAP16234 1089 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ZNF18P17022 549 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 RBMS1P29558 406 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 AKT2P31751 481 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ACADSBP45954 432 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 FMO5P49326 533 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 METAP1P53582 386 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 GCNT1Q02742 428 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 MTA1Q13330 715 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 EIF4EBP2Q13542 120 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 DLG2Q15700 870 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 CAMK4Q16566 473 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ACCSLQ4AC99 568 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 RABGAP1LQ5R372 815 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ICE2Q659A1 982 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 RAP1GAP2Q684P5 730 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 TMC6Q7Z403 805 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 CHSY1Q86X52 802 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ATP6V0D2Q8N8Y2 350 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 FAM149B1Q96BN6 582 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 APOLD1Q96LR9 279 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 SLC46A1Q96NT5 459 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 NT5C1BQ96P26 610 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 METTL14Q9HCE5 456 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 ASCL3Q9NQ33 180 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 SLC25A13Q9UJS0 675 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 PCDHB4Q9Y5E5 795 aa10.99□□□□□ -0.65
CALCOCO2-228ENST00000576582 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 TCAF2A6NFQ2 919 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 FFAR2O15552 330 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 WISP1O95388 367 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 IGLV3-25P01717 112 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 HNRNPA2B1P22626 353 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 OAS2P29728 719 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 GPD2P43304 727 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 TAS2R38P59533 333 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 YWHAZP63104 245 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 PNOCQ13519 176 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 LY6DQ14210 128 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 ISXQ2M1V0 245 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 SYPL2Q5VXT5 272 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 FOXR2Q6PJQ5 311 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 XKR5Q6UX68 686 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 LEKR1Q6ZMV7 388 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 C11orf57Q6ZUT1 292 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 TAC4Q86UU9 113 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 HORMAD1Q86X24 394 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 TMIEQ8NEW7 156 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 TPCN2Q8NHX9 752 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 MAPK15Q8TD08 544 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 RNF34Q969K3 372 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 VCPIP1Q96JH7 1222 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 MED15Q96RN5 788 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 PRMT1Q99873 361 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 FEM1AQ9BSK4 669 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 SEMA4CQ9C0C4 833 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 OSBPL2Q9H1P3 480 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 POPDC2Q9HBU9 364 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 ARFGAP3Q9NP61 516 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 XPO7Q9UIA9 1087 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 CNTN6Q9UQ52 1028 aa10.98□□□□□ -0.65
CALCOCO2-228ENST00000576582 CA5BQ9Y2D0 317 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms