RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 GCATO75600 419 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 MT-CO1P00395 513 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 CALCAP01258 141 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 RABIFP47224 123 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 FGL2Q14314 439 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 CLCA4Q14CN2 919 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 IGFBP7Q16270 282 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 CNGA2Q16280 664 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 ARSIQ5FYB1 569 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 RABGAP1LQ5R372 815 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 TMEM270Q6UE05 265 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 RBFAQ8N0V3 343 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 ATP6V0D2Q8N8Y2 350 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 ATP11CQ8NB49 1132 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 TMIEQ8NEW7 156 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 OR52K2Q8NGK3 314 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 OR2A12Q8NGT7 310 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 CCDC114Q96M63 670 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 BOCQ9BWV1 1114 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXP3Q9BZS1 431 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 STRADBQ9C0K7 418 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 GPR27Q9NS67 375 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 GEMIN8Q9NWZ8 242 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 SPASTQ9UBP0 616 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 PISDQ9UG56 409 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 PADI4Q9UM07 663 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 PCDHGA4Q9Y5G9 962 aa16.66■□□□□ 0.26
CTDNEP1-211ENST00000575783 SPINT1O43278 529 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 JMJD7P0C870 316 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 LIPCP11150 499 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 SRCP12931 536 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 RPS21P63220 83 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 CENPCQ03188 943 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 EIF3IQ13347 325 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 SKIDA1Q1XH10 827 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 CBWD6Q4V339 395 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 PRRT3Q5FWE3 981 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 CBWD3Q5JTY5 395 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 CBWD5Q5RIA9 395 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 TPRG1LQ5T0D9 272 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 TTC39BQ5VTQ0 682 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXD4L5Q5VV16 416 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 TCERG1LQ5VWI1 586 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 CHST14Q8NCH0 376 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 GRIN3AQ8TCU5 1115 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 FOXD4L4Q8WXT5 416 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 FEM1CQ96JP0 617 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 RPRD1AQ96P16 312 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 PRMT1Q99873 361 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 ZSWIM1Q9BR11 485 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 TCEAL2Q9H3H9 227 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 GULP1Q9UBP9 304 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 DACH1Q9UI36 760 aa16.65■□□□□ 0.26
CTDNEP1-211ENST00000575783 K7ERQ8 282 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 NTN3O00634 580 aaPredicted RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 FPGTO14772 594 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 TRUB2O95900 331 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 PRNPP04156 253 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 ANXA6P08133 673 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 EIF2B5Q13144 721 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 SGCGQ13326 291 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 ESRP1Q6NXG1 681 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 FBXL22Q6P050 247 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 BTN2A2Q8WVV5 523 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 GFM1Q96RP9 751 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 HDAC8Q9BY41 377 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 MUC3BQ9H195 1237 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 EPN3Q9H201 632 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 APOBEC3BQ9UH17 382 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 ACSL6Q9UKU0 697 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 PCDHB4Q9Y5E5 795 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 OR51B4Q9Y5P0 310 aa16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 SPTAN1Q13813 2472 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-211ENST00000575783 SYNJ2BP-COX16A0A087WUM0 186 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 TMX2-CTNND1H3BSU7 103 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 RNF225M0QZC1 329 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 NVLO15381 856 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 YY2O15391 372 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 ENDOD1O94919 500 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 PAEPP09466 180 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 WT1P19544 449 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 RRM1P23921 792 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 IRAK1P51617 712 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 PITX1P78337 314 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 SERINC3Q13530 473 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 UBR7Q8N806 425 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 HTR3CQ8WXA8 447 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 TNKS2Q9H2K2 1166 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 COX16Q9P0S2 106 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms