RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ITGA7Q13683 1181 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 COL9A2Q14055 689 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PDE1CQ14123 709 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 GRM2Q14416 872 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PRPSAP1Q14558 356 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PDK2Q15119 407 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 MGAT5BQ3V5L5 792 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 SH2D4BQ5SQS7 431 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PGM2L1Q6PCE3 622 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ARHGAP24Q8N264 748 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ALKBH8Q96BT7 664 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 MAML3Q96JK9 1138 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 LENG8Q96PV6 779 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 TMEM209Q96SK2 561 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 EBNA1BP2Q99848 306 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 VCX3BQ9H321 246 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 VCX3AQ9NNX9 186 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 RBM22Q9NW64 420 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ARHGEF38Q9NXL2 777 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF195O14628 629 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CLPTM1O96005 669 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CPA3P15088 417 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 FDFT1P37268 417 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PSMD7P51665 324 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 THOP1P52888 689 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 HPCAP84074 193 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 TSTA3Q13630 321 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PCLAFQ15004 111 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CNGA3Q16281 694 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ANKRD20A4Q4UJ75 823 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PDPK2PQ6A1A2 396 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ARHGAP36Q6ZRI8 547 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 SLC41A1Q8IVJ1 513 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 DENND6AQ8IWF6 608 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ANKRD52Q8NB46 1076 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PIWIL2Q8TC59 973 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 GIPC2Q8TF65 315 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ADAM2Q99965 735 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 SMPD4Q9NXE4 827 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PLOD2O00469 737 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 XPO1O14980 1071 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 GAS2O43903 313 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CHRNGP07510 517 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 HDCP19113 662 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 L1CAMP32004 1257 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CLDN10P78369 228 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PPIL2Q13356 520 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 SPATA2LQ8IUW3 424 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF567Q8N184 647 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CFAP52Q8N1V2 620 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 TMEM174Q8WUU8 243 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 KCTD4Q8WVF5 259 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 MCRS1Q96EZ8 462 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 C16orf70Q9BSU1 422 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 MRPL1Q9BYD6 325 aaKnown RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 A0A0U1RQS6 177 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 TK2O00142 265 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 SEC24DO94855 1032 aaPredicted RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 FBXO21O94952 628 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 CD4P01730 458 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 AOC1P19801 751 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 ATICP31939 592 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 SLC26A2P50443 739 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 CDH13P55290 713 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 PTPRCAPQ14761 206 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 SV2CQ496J9 727 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 TAPT1Q6NXT6 567 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 OLFML1Q6UWY5 402 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 TRIM67Q6ZTA4 783 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 GPRIN1Q7Z2K8 1008 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 ATPAF2Q8N5M1 289 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 PCDH20Q8N6Y1 951 aaKnown RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 ATAD1Q8NBU5 361 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 RMDN1Q96DB5 314 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 PCED1BQ96HM7 432 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 TUBB6Q9BUF5 446 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 FTHL17Q9BXU8 183 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 RBM38Q9H0Z9 239 aaKnown RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 LHX5Q9H2C1 402 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 ANLNQ9NQW6 1124 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 DTNAQ9Y4J8 743 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 LTFP02788 710 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 DARSP14868 501 aaKnown RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 NPR3P17342 541 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 TPP2P29144 1249 aaPredicted RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 GRK4P32298 578 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 PRAMEP78395 509 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 SEMG2Q02383 582 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 MPP3Q13368 585 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 STILQ15468 1287 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
RPAIN-215ENST00000575112 DNAL1Q4LDG9 190 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
RPAIN-215ENST00000575112 LCA5Q86VQ0 697 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms