RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 FIBCD1Q8N539 461 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 SLC15A4Q8N697 577 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ITPKCQ96DU7 683 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 WDR83Q9BRX9 315 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 MSTO1Q9BUK6 570 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 HERC2P3Q9BVR0 1158 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CEP44Q9C0F1 390 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 XPNPEP3Q9NQH7 507 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PDGFCQ9NRA1 345 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 COPG2Q9UBF2 871 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DKK3Q9UBP4 350 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 C7orf72A4D263 438 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 PSMD11O00231 422 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TRIM13O60858 407 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CLASP2O75122 1294 aaKnown RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MT-CO1P00395 513 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 GJB1P08034 283 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 GSSP48637 474 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TUBA4AP68366 448 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 OGDHQ02218 1023 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MOGQ16653 247 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 KCTD8Q6ZWB6 473 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TTC30AQ86WT1 665 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 COPS5Q92905 334 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MS4A4AQ96JQ5 239 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 DHRS1Q96LJ7 313 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 RAD21L1Q9H4I0 556 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 ASNSD1Q9NWL6 643 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 RNF181Q9P0P0 153 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CCDC78A2IDD5 438 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 M0R3G1 203 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 APOL1O14791 398 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MYO1DO94832 1006 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 PIGNO95427 931 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 KRT8P05787 483 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 FGF3P11487 239 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MPSTP25325 297 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MIPP30301 263 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TNFSF9P41273 254 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 ORC1Q13415 861 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MTERF2Q49AM1 385 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 NANOGP8Q6NSW7 305 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 ZC3H7AQ8IWR0 971 aaKnown RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 AFAP1L2Q8N4X5 818 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CCNYQ8ND76 341 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 FNIP1Q8TF40 1166 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 LPGAT1Q92604 370 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 APBA2Q99767 749 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 DGCR6LQ9BY27 220 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 HMG20AQ9NP66 347 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CCDC167Q9P0B6 97 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 USP18Q9UMW8 372 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 AP4E1Q9UPM8 1137 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 RNF11Q9Y3C5 154 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TOR1BO14657 336 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 DLGAP3O95886 979 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CHEK2O96017 543 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 TCEA1P23193 301 aaKnown RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CDK18Q07002 472 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 RPS6KA2Q15349 733 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 STXBP2Q15833 593 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 AGKQ53H12 422 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 CES4AQ5XG92 561 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 HEATR6Q6AI08 1181 aaKnown RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 ADCK1Q86TW2 530 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 JOSD2Q8TAC2 188 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 UNKQ9C0B0 810 aaKnown RBP9.72□□□□□ -0.85
CCDC40-212ENST00000574799 PTPRHQ9HD43 1115 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
CCDC40-212ENST00000574799 KRBA1A5PL33 1030 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 TAF4O00268 1085 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 PIM1P11309 404 aaPredicted RBP9.71□□□□□ -0.85
CCDC40-212ENST00000574799 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.85
CCDC40-212ENST00000574799 PROZP22891 400 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 CNTFP26441 200 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 CASP2P42575 452 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 STX1BP61266 288 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 DNASE1L3Q13609 305 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 KIF19Q2TAC6 998 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 LSM12Q3MHD2 195 aaKnown RBP9.71□□□□□ -0.85
CCDC40-212ENST00000574799 XKR3Q5GH77 459 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 C9orf131Q5VYM1 1079 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 ZBTB33Q86T24 672 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 DHFR2Q86XF0 187 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 RAVER1Q8IY67 606 aaKnown RBP9.71□□□□□ -0.85
CCDC40-212ENST00000574799 DHRSXQ8N5I4 330 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 LINC01465Q8N7H1 131 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 OR5B17Q8NGF7 314 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 SGF29Q96ES7 293 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 SLC29A1Q99808 456 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 NEURL2Q9BR09 285 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 ZBED2Q9BTP6 218 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 TPK1Q9H3S4 243 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 ZNF302Q9NR11 478 aa9.71□□□□□ -0.85
CCDC40-212ENST00000574799 SNX5Q9Y5X3 404 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms