RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 KRBA1A5PL33 1030 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 SLC22A2O15244 555 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 MAP4P27816 1152 aaKnown RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 GRIA3P42263 894 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ATXN1P54253 815 aaKnown RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 NFATC3Q12968 1075 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 DGKDQ16760 1214 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 BOLA3Q53S33 107 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 LDLRAP1Q5SW96 308 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 NANOGNBQ7Z5D8 188 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 IFNLR1Q8IU57 520 aaPredicted RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 CDAN1Q8IWY9 1227 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 URGCPQ8TCY9 931 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 KCNN1Q92952 543 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 SNX27Q96L92 541 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 SLC39A3Q9BRY0 314 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ELOVL4Q9GZR5 314 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 MORF4L1Q9UBU8 362 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 AURKCQ9UQB9 309 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 CNOT3O75175 753 aaKnown RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 KCNH1O95259 989 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 ESRRBO95718 433 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 POLBP06746 335 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 MYF6P23409 242 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 SPRP35270 261 aaPredicted RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 NAMPTP43490 491 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 GALNT2Q10471 571 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 MERTKQ12866 999 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 TRIM16LQ309B1 348 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 DACT2Q5SW24 774 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 C4orf22Q6V702 233 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 TTC30AQ86WT1 665 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 TNIP2Q8NFZ5 429 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 PBXIP1Q96AQ6 731 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 TCF12Q99081 682 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 MTG1Q9BT17 334 aaPredicted RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 EFHD1Q9BUP0 239 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 UNKQ9C0B0 810 aaKnown RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 UNC93B1Q9H1C4 597 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 PORCNQ9H237 461 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 CCDC167Q9P0B6 97 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 SEPT10Q9P0V9 454 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 PTBP2Q9UKA9 531 aaKnown RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 TRIM24O15164 1050 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 PAPSS1O43252 624 aaPredicted RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 PLA2G6O60733 806 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 MATN1P21941 496 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 MAGEA12P43365 314 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 NME5P56597 212 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 ACTR2P61160 394 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 TNK2Q07912 1038 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 C6orf10Q5SRN2 563 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 LIPMQ5VYY2 423 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 BTLAQ7Z6A9 289 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 CLEC14AQ86T13 490 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 IGFN1Q86VF2 1251 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 LSMEM2Q8N112 164 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 ANKFN1Q8N957 763 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 SCYL1Q96KG9 808 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
SMG6-215ENST00000574501 CCDC68Q9H2F9 335 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 CACNA2D2Q9NY47 1150 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 DOCK5Q9H7D0 1870 aa14.62□□□□□ -0.07
SMG6-215ENST00000574501 RNF103-CHMP3A0A140T963 221 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 GOLGA8TH3BQL2 631 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 CLASP2O75122 1294 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 USP12O75317 370 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 ADSLP30566 484 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 IREB2P48200 963 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 LIMK2P53671 638 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 AP3M2P53677 418 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 MLLT10P55197 1068 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 RPS3AP61247 264 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 PRKAA1Q13131 559 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 REP15Q6BDI9 236 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 PODNQ7Z5L7 613 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 TMEM110Q86TL2 294 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 CDR2LQ86X02 465 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 EPHX4Q8IUS5 362 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 CCNYL1Q8N7R7 359 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 RDM1Q8NG50 284 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 TRUB1Q8WWH5 349 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 HTR3CQ8WXA8 447 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 ZNF669Q96BR6 464 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 UHRF1Q96T88 793 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 EIF2AQ9BY44 585 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 SOX17Q9H6I2 414 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 GIN1Q9NXP7 522 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 DAPK2Q9UIK4 370 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 DYNC1LI2O43237 492 aaPredicted RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 SNAP91O60641 907 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 H2AFYO75367 372 aaKnown RBP14.61□□□□□ -0.07
SMG6-215ENST00000574501 SBK3P0C264 359 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 BMP2P12643 396 aa14.61□□□□□ -0.07
SMG6-215ENST00000574501 KCNA2P16389 499 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms