RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 KIAA1161Q6NSJ0 714 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 TMIEQ8NEW7 156 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 FEM1CQ96JP0 617 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 MED15Q96RN5 788 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 FEM1AQ9BSK4 669 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
CTNS-208ENST00000574218 STRADBQ9C0K7 418 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 COX16Q9P0S2 106 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 SPASTQ9UBP0 616 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
CTNS-208ENST00000574218 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
CTNS-208ENST00000574218 SPTY2D1-AS1A0A0U1RR47 76 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 TMX2-CTNND1H3BSU7 103 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 TERTO14746 1132 aaKnown RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 TPP1O14773 563 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 CLDN11O75508 207 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 ITGB2P05107 769 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 ANXA6P08133 673 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 RHOCP08134 193 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SRCP12931 536 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 CMA1P23946 247 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 NEK3P51956 506 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 MCCD1P59942 119 aaPredicted RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 YWHAZP63104 245 aaKnown RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 CENPCQ03188 943 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SRSF1Q07955 248 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTNS-208ENST00000574218 DPYDQ12882 1025 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SGCGQ13326 291 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 EIF3IQ13347 325 aaKnown RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 PDE1CQ14123 709 aaPredicted RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SEL1L3Q68CR1 1132 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 ESRP1Q6NXG1 681 aaKnown RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 C14orf80Q86SX3 495 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 FBXO39Q8N4B4 442 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 UBR7Q8N806 425 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 EXD3Q8N9H8 876 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 GRIN3AQ8TCU5 1115 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 HDAC8Q9BY41 377 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SLC17A9Q9BYT1 436 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 EPB41L5Q9HCM4 733 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 IL36AQ9UHA7 158 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 DOLKQ9UPQ8 538 aa12.21□□□□□ -0.45
CTNS-208ENST00000574218 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
CTNS-208ENST00000574218 CHD5Q8TDI0 1954 aa12.21□□□□□ -0.46
CTNS-208ENST00000574218 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.46
CTNS-208ENST00000574218 TLN1Q9Y490 2541 aaKnown RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 A0A1W2PNU3 283 aaPredicted RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 POM121BA6NF01 834 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 PLD2O14939 933 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 MED7O43513 233 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 PPFIA2O75334 1257 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 PAK4O96013 591 aaPredicted RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 CTSLP07711 333 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 THOP1P52888 689 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 NFKB2Q00653 900 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 DNM1Q05193 864 aaKnown RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 FZD2Q14332 565 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 MANEAQ5SRI9 462 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 PERM1Q5SV97 790 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 FBXL22Q6P050 247 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 EXTL1Q92935 676 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 LIN37Q96GY3 246 aaPredicted RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 BMFQ96LC9 184 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 PRMT1Q99873 361 aaKnown RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 CCDC3Q9BQI4 270 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 CAAP1Q9H8G2 361 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 STARD5Q9NSY2 213 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 APOBEC3BQ9UH17 382 aaKnown RBP12.2□□□□□ -0.46
CTNS-208ENST00000574218 HS3ST2Q9Y278 367 aa12.2□□□□□ -0.46
CTNS-208ENST00000574218 M0QYT0 321 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 NEMP1O14524 444 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 EFSO43281 561 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 IGLV3-25P01717 112 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 JMJD7P0C870 316 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 KRT5P13647 590 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 RRM1P23921 792 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 SLC5A2P31639 672 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 NOS2P35228 1153 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 FMO5P49326 533 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 CLCN6P51797 869 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 CDH4P55283 916 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 AUHQ13825 339 aaKnown RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 DRAP1Q14919 205 aaPredicted RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 LINC00303Q3SY05 128 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms