RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 C7P10643 843 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 GBE1Q04446 702 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 GALNT2Q10471 571 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 ARHGAP36Q6ZRI8 547 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 ZBTB44Q8NCP5 570 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 PCDHGA2Q9Y5H1 932 aa33.74■■■□□ 2.99
CTDNEP1-209ENST00000574205 FANCMQ8IYD8 2048 aa33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 DDX3YO15523 660 aaKnown RBP33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 KRT10P13645 584 aa33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 TPSD1Q9BZJ3 242 aa33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 RSPH9Q9H1X1 276 aaPredicted RBP33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 DTLQ9NZJ0 730 aa33.73■■■□□ 2.99
CTDNEP1-209ENST00000574205 EML5Q05BV3 1969 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 MAFKO60675 156 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 ZNF821O75541 412 aaPredicted RBP33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 TMCC1O94876 653 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 MX2P20592 715 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 GARSP41250 739 aaKnown RBP33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 KAZNQ674X7 775 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 PRCCQ92733 491 aaPredicted RBP33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 SLC6A17Q9H1V8 727 aa33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 FARP1Q9Y4F1 1045 aaPredicted RBP33.72■■■□□ 2.99
CTDNEP1-209ENST00000574205 RNASEH1O60930 286 aaKnown RBP33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 CETN2P41208 172 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 RECQLP46063 649 aaPredicted RBP33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 STK40Q8N2I9 435 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 OR2A12Q8NGT7 310 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 OR8D1Q8WZ84 308 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 SIPA1Q96FS4 1042 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 FAM129BQ96TA1 746 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 TNKS2Q9H2K2 1166 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 TRMT1Q9NXH9 659 aaKnown RBP33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 PYCARDQ9ULZ3 195 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 EFR3BQ9Y2G0 817 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 HEY1Q9Y5J3 304 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 SHROOM3Q8TF72 1996 aa33.71■■■□□ 2.99
CTDNEP1-209ENST00000574205 MCF2LO15068 1137 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 ALOX15BO15296 676 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 BNIP3LO60238 219 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 CST8O60676 142 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 PTPN7P35236 360 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 DYNLT1P63172 113 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 SLC10A2Q12908 348 aaPredicted RBP33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 RFTN1Q14699 578 aaPredicted RBP33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 LLGL1Q15334 1064 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 MEI1Q5TIA1 1274 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 ZNF776Q68DI1 518 aaPredicted RBP33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 ZC3H14Q6PJT7 736 aaKnown RBP33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 ZNF599Q96NL3 588 aa33.7■■■□□ 2.99
CTDNEP1-209ENST00000574205 MAP3K6O95382 1288 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 PYGMP11217 842 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 KIAA1324Q6UXG2 1013 aaKnown RBP33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 DSG4Q86SJ6 1040 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 PLPP6Q8IY26 295 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 TGM2P21980 687 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 ZBTB16Q05516 673 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 CARD16Q5EG05 197 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 HDAC11Q96DB2 347 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 OSBPL8Q9BZF1 889 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 TM6SF2Q9BZW4 377 aa33.69■■■□□ 2.98
CTDNEP1-209ENST00000574205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.69■■■□□ 2.981e-7■□□□□ 8.6
CTDNEP1-209ENST00000574205 ZNF217O75362 1048 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 CNR2P34972 360 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 NR2C2P49116 596 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 DNA2P51530 1060 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 RPS14P62263 151 aaKnown RBP33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 SNRPD1P62314 119 aaKnown RBP33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 ADCY2Q08462 1091 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 CYTH1Q15438 398 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 USP39Q53GS9 565 aaKnown RBP33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 TMCO4Q5TGY1 634 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 DPY19L3Q6ZPD9 716 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 BZW1Q7L1Q6 419 aaKnown RBP33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 CACUL1Q86Y37 369 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 OR2AP1Q8NGE2 309 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 TSGA13Q96PP4 275 aa33.68■■■□□ 2.98
CTDNEP1-209ENST00000574205 LILRB5O75023 590 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 GSRP00390 522 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 DNTTP04053 509 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 ACADMP11310 421 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 RHOAP61586 193 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 RPS6KA1Q15418 735 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 TIGD7Q6NT04 549 aaPredicted RBP33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 BBS12Q6ZW61 710 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 MMAAQ8IVH4 418 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 NSMCE1Q8WV22 266 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 HEMGNQ9BXL5 484 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 SCML1Q9UN30 329 aa33.67■■■□□ 2.98
CTDNEP1-209ENST00000574205 GOLGA6L9A6NEM1 432 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 PEX11BO96011 259 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 CST6Q15828 149 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 DCAF12L1Q5VU92 463 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 NPNTQ6UXI9 565 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 ATOH1Q92858 354 aaPredicted RBP33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 OLFM3Q96PB7 478 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 PLXND1Q9Y4D7 1925 aa33.66■■■□□ 2.98
CTDNEP1-209ENST00000574205 IL1BP01584 269 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 CCNCP24863 283 aa33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 CCNHP51946 323 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-209ENST00000574205 ZNF211Q13398 564 aaPredicted RBP33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms