RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 IL36AQ9UHA7 158 aa21.6■■□□□ 1.05
CHRNB1-206ENST00000574054 LHX6Q9UPM6 363 aa21.6■■□□□ 1.05
CHRNB1-206ENST00000574054 A0A1W2PQU0 124 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 EPHB6O15197 1021 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 LAMA5O15230 3695 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 CHRNB2P17787 502 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 MMP8P22894 467 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 SDC4P31431 198 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 ANP32AP39687 249 aaKnown RBP21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RXRGP48443 463 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 GNA12Q03113 381 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 OVGP1Q12889 678 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 SMAD1Q15797 465 aaKnown RBP21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 C15orf59Q2T9L4 293 aaPredicted RBP21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RAB6CQ53S08 254 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 ARTNQ5T4W7 220 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RWDD4Q6NW29 188 aaKnown RBP21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 DPY19L3Q6ZPD9 716 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RXFP2Q8WXD0 754 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 PPP1R16AQ96I34 528 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RAB6CQ9H0N0 254 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 FANCLQ9NW38 375 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 ZNF212Q9UDV6 495 aa21.59■■□□□ 1.05
CHRNB1-206ENST00000574054 RNF103O00237 685 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 LEFTY1O75610 366 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 PCDH8O95206 1070 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 GJB6O95452 261 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 CYP1A1P04798 512 aaPredicted RBP21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 SERPINH1P50454 418 aaKnown RBP21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 JAM2P57087 298 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 ARL13BQ3SXY8 428 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 CLEC17AQ6ZS10 378 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 ERN2Q76MJ5 926 aaKnown RBP21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 HORMAD1Q86X24 394 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 KLHDC7BQ96G42 594 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 FZD3Q9NPG1 666 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 PPARGC1AQ9UBK2 798 aaKnown RBP21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 OR12D3Q9UGF7 316 aa21.58■■□□□ 1.05
CHRNB1-206ENST00000574054 TRABD2BA6NFA1 517 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 SDC3O75056 442 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 RFPL3O75679 317 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 ZMPSTE24O75844 475 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 STAT1P42224 750 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 ZNF284Q2VY69 593 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 CCDC14Q49A88 953 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 C19orf48Q6RUI8 117 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 TRIM72Q6ZMU5 477 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 ANKRD20A12PQ8NF67 263 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 JOSD2Q8TAC2 188 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 GPT2Q8TD30 523 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 HDAC8Q9BY41 377 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 CEP44Q9C0F1 390 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 RAXQ9Y2V3 346 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 FCF1Q9Y324 198 aaKnown RBP21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 PCDHGA1Q9Y5H4 931 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 DOCK9Q9BZ29 2069 aa21.57■■□□□ 1.04
CHRNB1-206ENST00000574054 KNTC1P50748 2209 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 THEGLP0DJG4 465 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 AKT2P31751 481 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 ADRA1BP35368 520 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 ACVRL1P37023 503 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 NSFP46459 744 aaKnown RBP21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 COPB1P53618 953 aaKnown RBP21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 CLDN6P56747 220 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 SLC20A2Q08357 652 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 CYP4F3Q08477 520 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 SYCP1Q15431 976 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 NEK5Q6P3R8 708 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 TMPRSS12Q86WS5 348 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 PCDH20Q8N6Y1 951 aaKnown RBP21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 NEK11Q8NG66 645 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 SEPT11Q9NVA2 429 aaKnown RBP21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 SIK3Q9Y2K2 1263 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 ACTL7AQ9Y615 435 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 WASF2Q9Y6W5 498 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 DOCK4Q8N1I0 1966 aa21.56■■□□□ 1.04
CHRNB1-206ENST00000574054 COL5A1P20908 1838 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 C2CD4BA6NLJ0 364 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ZNF821O75541 412 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ETFBP38117 255 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ACADVLP49748 655 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 CCNHP51946 323 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 NEK3P51956 506 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ARF5P84085 180 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 CARD16Q5EG05 197 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 SFMBT2Q5VUG0 894 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 SEL1L3Q68CR1 1132 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 SASS6Q6UVJ0 657 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 RYBPQ8N488 228 aaPredicted RBP21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 PDCD7Q8N8D1 485 aaKnown RBP21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 TMEM145Q8NBT3 493 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 FAM172AQ8WUF8 416 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 PCDHB18PQ96TA0 734 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 HEPHQ9BQS7 1158 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 CALN1Q9BXU9 219 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 TM6SF2Q9BZW4 377 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ZDHHC6Q9H6R6 413 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ADAM22Q9P0K1 906 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 DNAI1Q9UI46 699 aa21.55■■□□□ 1.04
CHRNB1-206ENST00000574054 ZFR2Q9UPR6 939 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms