RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ADCY5O95622 1261 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 IGLV3-19P01714 112 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 DNTTP04053 509 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 CYP1A1P04798 512 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 CFIP05156 583 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 SERPINF2P08697 491 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 GNSP15586 552 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ENGP17813 658 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 TFE3P19532 575 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 MAOBP27338 520 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 RPS14P62263 151 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 NOMO3P69849 1222 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ECT2LQ008S8 904 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 FMO1Q01740 532 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ZBTB16Q05516 673 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 GFPT1Q06210 699 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 SULT2A1Q06520 285 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ZNF177Q13360 481 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 HNRNPA1L2Q32P51 320 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 PLEKHG6Q3KR16 790 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 C5orf22Q49AR2 442 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ANO6Q4KMQ2 910 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 NAA35Q5VZE5 725 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 RNF219Q5W0B1 726 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 TRIM72Q6ZMU5 477 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ARCQ7LC44 396 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 APTXQ7Z2E3 356 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 C14orf80Q86SX3 495 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 FAM124AQ86V42 546 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 CACUL1Q86Y37 369 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 DHX40Q8IX18 779 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 AOPEPQ8N6M6 819 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 SLC20A1Q8WUM9 679 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 DNASE2BQ8WZ79 361 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 NUP205Q92621 2012 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 CCDC74AQ96AQ1 378 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 PGAP3Q96FM1 320 aaPredicted RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 RPL10LQ96L21 214 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 MRGPRX3Q96LB0 322 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 C1orf74Q96LT6 269 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 HSPA12BQ96MM6 686 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 TBCBQ99426 244 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ATXN2Q99700 1313 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 TKTL2Q9H0I9 626 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 HSD3B7Q9H2F3 369 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 MTG2Q9H4K7 406 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 PIGVQ9NUD9 493 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 ARHGEF38Q9NXL2 777 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 SUSD2Q9UGT4 822 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 SLCO3A1Q9UIG8 710 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 TMEM59LQ9UK28 342 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 NOCTQ9UK39 431 aaKnown RBP7.65□□□□□ -1.18
NUP88-205ENST00000572809 VANGL2Q9ULK5 521 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 NCKAP1Q9Y2A7 1128 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 HS3ST4Q9Y661 456 aa7.65□□□□□ -1.18
NUP88-205ENST00000572809 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 EDDM13A0A1B0GTR0 161 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 DRGXA6NNA5 263 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ENDOD1O94919 500 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 KCNK5O95279 499 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 SYPP08247 313 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 CCDC172P0C7W6 258 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 UNGP13051 313 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 ATP1A3P13637 1013 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 PDGFRAP16234 1089 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 MMP8P22894 467 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ACSL1P33121 698 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 FLT3P36888 993 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ATXN3P54252 364 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 CDH4P55283 916 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 SFSWAPQ12872 951 aaKnown RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 UAP1L1Q3KQV9 507 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 C9orf64Q5T6V5 341 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ACBD5Q5T8D3 534 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 DCAF12L1Q5VU92 463 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 OTUD1Q5VV17 481 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 ZNF776Q68DI1 518 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 CXorf57Q6NSI4 855 aaKnown RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 CAVIN1Q6NZI2 390 aaKnown RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 LRRC31Q6UY01 552 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 PHLDB2Q86SQ0 1253 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 CIR1Q86X95 450 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 SLC30A5Q8TAD4 765 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 PTPRN2Q92932 1015 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ALG14Q96F25 216 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 CFAP57Q96MR6 1250 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 HAPLN3Q96S86 360 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 PCDHB18PQ96TA0 734 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 BPIFA3Q9BQP9 254 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 FEM1AQ9BSK4 669 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 GTPBP2Q9BX10 602 aaKnown RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 BTBD1Q9H0C5 482 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 RSPH9Q9H1X1 276 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 CAPN10Q9HC96 672 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 ANLNQ9NQW6 1124 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 NDFIP2Q9NV92 336 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 FOXD3Q9UJU5 478 aaPredicted RBP7.64□□□□□ -1.19
NUP88-205ENST00000572809 SCML1Q9UN30 329 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms