RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	PLAU	P00749	431 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	FAM90A13P	P0C7W8	464 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	FAM90A24P	P0C7X0	464 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TGFB3	P10600	412 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TFEB	P19484	476 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TKT	P29401	623 aa	Known RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	GALNS	P34059	522 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	PIP4K2A	P48426	406 aa	Predicted RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	YPEL5	P62699	121 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	B4GALNT1	Q00973	533 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	GCKR	Q14397	625 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	KCNJ12	Q14500	433 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	CCDC152	Q4G0S7	254 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	FAXC	Q5TGI0	409 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	RSRC2	Q7L4I2	434 aa	Known RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	BEND5	Q7L4P6	421 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	MAATS1	Q7Z4T9	603 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	CLASRP	Q8N2M8	674 aa	Known RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	DNAAF4	Q8WXU2	420 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	PIGK	Q92643	395 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TRIM44	Q96DX7	344 aa	Predicted RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TNIP3	Q96KP6	325 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	FCRL5	Q96RD9	977 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	WDR24	Q96S15	920 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	SEZ6L	Q9BYH1	1024 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	MAGEB5	Q9BZ81	275 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	API5	Q9BZZ5	524 aa	Known RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TAOK3	Q9H2K8	898 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	NLRC4	Q9NPP4	1024 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	RASSF1	Q9NS23	344 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TBC1D23	Q9NUY8	699 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	HEY2	Q9UBP5	337 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	ATP6V0A2	Q9Y487	856 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	TTLL3	Q9Y4R7	772 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	DGKB	Q9Y6T7	804 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	MORC2	Q9Y6X9	1032 aa	Predicted RBP	3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	KIF16B	Q96L93	1317 aa		3.92	□□□□□ -1.78
CDC27-213	ENST00000571643	ADCY9	O60503	1353 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	SLX4	Q8IY92	1834 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643		H3BNX3	289 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643		K7ENM7	598 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	CA12	O43570	354 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	NBN	O60934	754 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	TOMM40	O96008	361 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	IGKV5-2	P06315	115 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	RPS6KB1	P23443	525 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	GPT	P24298	496 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	CHRNA5	P30532	468 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	RPS8	P62241	208 aa	Known RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	RAE1	P78406	368 aa	Known RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	WASHC5	Q12768	1159 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	MTAP	Q13126	283 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	GRAP	Q13588	217 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ELF2	Q15723	593 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	AASDH	Q4L235	1098 aa	Predicted RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	COBLL1	Q53SF7	1204 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	SPECC1	Q5M775	1068 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	BEND3	Q5T5X7	828 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	DAB2IP	Q5VWQ8	1189 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	GRHL2	Q6ISB3	625 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	C1orf228	Q6PIY5	440 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	FAM57B	Q71RH2	274 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	LCA5	Q86VQ0	697 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ATP11C	Q8NB49	1132 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	GRAPL	Q8TC17	118 aa	Predicted RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	OVCA2	Q8WZ82	227 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	CCDC47	Q96A33	483 aa	Known RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	MYD88	Q99836	296 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	TUBB6	Q9BUF5	446 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	COLEC11	Q9BWP8	271 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	CHMP4B	Q9H444	224 aa	Known RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ERVK-5	Q9HDB9	667 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	PAPOLB	Q9NRJ5	636 aa	Known RBP	3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ABHD10	Q9NUJ1	306 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	PCDHGB6	Q9Y5F9	930 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	SQOR	Q9Y6N5	450 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	UTY	O14607	1347 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ITIH6	Q6UXX5	1313 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	SYNRG	Q9UMZ2	1314 aa		3.91	□□□□□ -1.78
CDC27-213	ENST00000571643	ABCC12	Q96J65	1359 aa		3.9	□□□□□ -1.78
CDC27-213	ENST00000571643	CCDC88A	Q3V6T2	1871 aa		3.9	□□□□□ -1.78
CDC27-213	ENST00000571643	LRRC37A	A6NMS7	1700 aa		3.9	□□□□□ -1.78
CDC27-213	ENST00000571643	DDX60	Q8IY21	1712 aa	Known RBP	3.9	□□□□□ -1.78
CDC27-213	ENST00000571643	SNED1	Q8TER0	1413 aa		3.9	□□□□□ -1.78
CDC27-213	ENST00000571643	GLTPD2	A6NH11	291 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	CD8B2	A6NJW9	211 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	C2CD4B	A6NLJ0	364 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643		B4DGG1	531 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	GRM8	O00222	908 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	PSG1	P11464	419 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	TNFAIP3	P21580	790 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	PSMA3	P25788	255 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	SERPINB3	P29508	390 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	ALDH7A1	P49419	539 aa	Known RBP	3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	RARS	P54136	660 aa	Known RBP	3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	MTX1	Q13505	466 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	EARS2	Q5JPH6	523 aa	Known RBP	3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	ABLIM2	Q6H8Q1	611 aa		3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.9	□□□□□ -1.79
CDC27-213	ENST00000571643	CRELD2	Q6UXH1	353 aa	Predicted RBP	3.9	□□□□□ -1.79

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