RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 CXorf57Q6NSI4 855 aaKnown RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 KIAA1161Q6NSJ0 714 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 ERN2Q76MJ5 926 aaKnown RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 RAB11FIP2Q7L804 512 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 CIR1Q86X95 450 aaPredicted RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 JAMLQ86YT9 394 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 FBXO39Q8N4B4 442 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 LMX1AQ8TE12 382 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 TFAP2BQ92481 460 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 FEM1CQ96JP0 617 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 BOCQ9BWV1 1114 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 SLC17A9Q9BYT1 436 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 SEPT10Q9P0V9 454 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 SPASTQ9UBP0 616 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 ZFR2Q9UPR6 939 aaKnown RBP11.61□□□□□ -0.55
CHMP6-202ENST00000571457 MAPK8IP1Q9UQF2 711 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 HS3ST2Q9Y278 367 aa11.61□□□□□ -0.55
CHMP6-202ENST00000571457 BSNQ9UPA5 3926 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 POM121BA6NF01 834 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 FPGTO14772 594 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 TRUB2O95900 331 aaKnown RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CTSLP07711 333 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 LIPCP11150 499 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 RECQLP46063 649 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 KRT83P78385 493 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 SGCGQ13326 291 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 PDE1CQ14123 709 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CBWD6Q4V339 395 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ZCWPW2Q504Y3 356 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 DCAF17Q5H9S7 520 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CBWD3Q5JTY5 395 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CBWD5Q5RIA9 395 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 PERM1Q5SV97 790 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 SYPL2Q5VXT5 272 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 SEL1L3Q68CR1 1132 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ESRP1Q6NXG1 681 aaKnown RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 UBR7Q8N806 425 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ATP11CQ8NB49 1132 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 OR2A12Q8NGT7 310 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ALG14Q96F25 216 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 BMFQ96LC9 184 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 PRMT1Q99873 361 aaKnown RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CCDC3Q9BQI4 270 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 SLC25A18Q9H1K4 315 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CAAP1Q9H8G2 361 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 POPDC2Q9HBU9 364 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 ST7Q9NRC1 585 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 PCDHB4Q9Y5E5 795 aa11.6□□□□□ -0.55
CHMP6-202ENST00000571457 TEP1Q99973 2627 aaKnown RBP11.6□□□□□ -0.55
CHMP6-202ENST00000571457 LMO7DNF2Z398 122 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 NOBOXO60393 691 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 CLDN11O75508 207 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 PAK4O96013 591 aaPredicted RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 ANXA6P08133 673 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 SRCP12931 536 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 CCR1P32246 355 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 UGT1A5P35504 534 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 RPL34P49207 117 aaKnown RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 CLCN6P51797 869 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 NEK3P51956 506 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 PDX1P52945 283 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 LRMPQ12912 555 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 SERINC3Q13530 473 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 MANEAQ5SRI9 462 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 FBXL22Q6P050 247 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 SLC35F3Q8IY50 421 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 SCG3Q8WXD2 468 aaKnown RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 TBATAQ96M53 351 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 MED15Q96RN5 788 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 MUC3BQ9H195 1237 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 GEMIN8Q9NWZ8 242 aaKnown RBP11.59□□□□□ -0.55
CHMP6-202ENST00000571457 KLF15Q9UIH9 416 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 PADI4Q9UM07 663 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 OR51B4Q9Y5P0 310 aa11.59□□□□□ -0.55
CHMP6-202ENST00000571457 RELNP78509 3460 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 NBPF19A0A087WUL8 3843 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 NTN3O00634 580 aaPredicted RBP11.58□□□□□ -0.56
CHMP6-202ENST00000571457 SLC16A3O15427 465 aaKnown RBP11.58□□□□□ -0.56
CHMP6-202ENST00000571457 IGLV3-25P01717 112 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 JMJD7P0C870 316 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
CHMP6-202ENST00000571457 THOP1P52888 689 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 ADKP55263 362 aaKnown RBP11.58□□□□□ -0.56
CHMP6-202ENST00000571457 CDK17Q00537 523 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 AUHQ13825 339 aaKnown RBP11.58□□□□□ -0.56
CHMP6-202ENST00000571457 PTK2BQ14289 1009 aa11.58□□□□□ -0.56
CHMP6-202ENST00000571457 DRAP1Q14919 205 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms