RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CNTFP26441 200 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 NPY2RP49146 381 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 SLC18A2Q05940 514 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 ANO4Q32M45 955 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 SPANXN3Q5MJ09 141 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 TRMT10BQ6PF06 316 aaKnown RBP17.65■□□□□ 0.42
RPAIN-208ENST00000571043 ARHGAP36Q6ZRI8 547 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 PIGWQ7Z7B1 504 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 LINC00523Q86TU6 105 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 MIB1Q86YT6 1006 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 CACNA2D3Q8IZS8 1091 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 OR52K1Q8NGK4 314 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 CDKL2Q92772 493 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 OXNAD1Q96HP4 312 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-208ENST00000571043 PRKD2Q9BZL6 878 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 MLXIPLQ9NP71 852 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 NDFIP2Q9NV92 336 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 SYBUQ9NX95 663 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 VANGL2Q9ULK5 521 aa17.65■□□□□ 0.42
RPAIN-208ENST00000571043 CCDC195A0A1B0GUA6 201 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 TCP11X1B4DZS4 312 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 CCL16O15467 120 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 POLBP06746 335 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 RPA3P35244 121 aaPredicted RBP17.64■□□□□ 0.41
RPAIN-208ENST00000571043 PAPOLAP51003 745 aaKnown RBP17.64■□□□□ 0.41
RPAIN-208ENST00000571043 CRYMQ14894 314 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 TAF12Q16514 161 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 CTC1Q2NKJ3 1217 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 NAPEPLDQ6IQ20 393 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 KLHDC10Q6PID8 442 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 RGS9BPQ6ZS82 235 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 SH2D5Q6ZV89 423 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 MARK2Q7KZI7 788 aaKnown RBP17.64■□□□□ 0.41
RPAIN-208ENST00000571043 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 LRRC3Q9BY71 257 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 GLOD4Q9HC38 313 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 DZANK1Q9NVP4 752 aa17.64■□□□□ 0.41
RPAIN-208ENST00000571043 MAGED2Q9UNF1 606 aaPredicted RBP17.64■□□□□ 0.41
RPAIN-208ENST00000571043 LINC01565O15544 149 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 ANXA9O76027 345 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 PTPN2P17706 415 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 NIPAL4Q0D2K0 466 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 COL19A1Q14993 1142 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 FBXL22Q6P050 247 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 C6orf89Q6UWU4 347 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 Q7L0L9 218 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 ZNF707Q96C28 371 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 CDX2Q99626 313 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 TRIM56Q9BRZ2 755 aaKnown RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 RETREG1Q9H6L5 497 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 NOL6Q9H6R4 1146 aaKnown RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 CCSER2Q9H7U1 834 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 UXTQ9UBK9 157 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 IPO11Q9UI26 975 aaKnown RBP17.63■□□□□ 0.41
RPAIN-208ENST00000571043 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 C2orf16Q68DN1 1984 aa17.63■□□□□ 0.41
RPAIN-208ENST00000571043 TRIM49D1C9J1S8 452 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 OBSL1O75147 1896 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 XYLBO75191 536 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 F11P03951 625 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 TAC1P20366 129 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 ATP5C1P36542 298 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 PPP3CCP48454 512 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 CRADDP78560 199 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 MGAT5Q09328 741 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 CDH17Q12864 832 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 DNAJC3Q13217 504 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 SLC1A5Q15758 541 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 HHATQ5VTY9 493 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 TIFABQ6ZNK6 161 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 YTHDF3Q7Z739 585 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 DNAAF3Q8N9W5 541 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 CCDC197Q8NCU1 140 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 USP33Q8TEY7 942 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 APOPT1Q96IL0 206 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 SERAC1Q96JX3 654 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 IL22Q9GZX6 179 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 IL21Q9HBE4 155 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 MKS1Q9NXB0 559 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 FAM169AQ9Y6X4 670 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 ZNF840PA6NDX5 716 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 USP1O94782 785 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 HOXB8P17481 243 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 MAPKAPK2P49137 400 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 NEK3P51956 506 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 EPHA5P54756 1037 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 GEMP55040 296 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 HNRNPDQ14103 355 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 ITIH4Q14624 930 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 SEPT7Q16181 437 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 PDK4Q16654 411 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 C5orf22Q49AR2 442 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 PABPC1LQ4VXU2 614 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 HECTD3Q5T447 861 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 RAP1GAP2Q684P5 730 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 ANKRD54Q6NXT1 300 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 OTOP3Q7RTS5 596 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms