RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SEMG2Q02383 582 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 RABGAP1LQ5R372 815 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 ZFYVE27Q5T4F4 411 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 DHRS13Q6UX07 377 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 METTL3Q86U44 580 aaKnown RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 CCDC117Q8IWD4 279 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 HSPH1Q92598 858 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 SNRNP25Q9BV90 132 aaKnown RBP13.66□□□□□ -0.22
CCDC40-205ENST00000571028 LACRTQ9GZZ8 138 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 CD248Q9HCU0 757 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 MARK1Q9P0L2 795 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
CCDC40-205ENST00000571028 KALRNO60229 2985 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 URB1O60287 2271 aaKnown RBP13.65□□□□□ -0.22
CCDC40-205ENST00000571028 PLXNB3Q9ULL4 1909 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 PRRT4C9JH25 899 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 ARHGAP6O43182 974 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 CNTN5O94779 1100 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 JUPP14923 745 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 IL1R2P27930 398 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 TPMTP51580 245 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 CCZ1BP86790 482 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-205ENST00000571028 MTA1Q13330 715 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 CDH18Q13634 790 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 CA9Q16790 459 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 FUT11Q495W5 492 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 TFAP2DQ7Z6R9 452 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 TMPRSS12Q86WS5 348 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 ZNF843Q8N446 348 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 PRORYQ9H606 182 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 ITM2CQ9NQX7 267 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 ABCB8Q9NUT2 735 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 USP36Q9P275 1121 aaKnown RBP13.65□□□□□ -0.22
CCDC40-205ENST00000571028 OR12D3Q9UGF7 316 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
CCDC40-205ENST00000571028 MACROD2A1Z1Q3 448 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 METTL12A8MUP2 240 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 WASH3PC4AMC7 463 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 EIF2S3P41091 472 aaKnown RBP13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CCT8P50990 548 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CFHR1Q03591 330 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 KIF5AQ12840 1032 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 HADHQ16836 314 aaKnown RBP13.64□□□□□ -0.23
CCDC40-205ENST00000571028 ALFQ53S48 1182 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 PPP6R3Q5H9R7 873 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-205ENST00000571028 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 DBX2Q6ZNG2 339 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 GPR155Q7Z3F1 870 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
CCDC40-205ENST00000571028 UCMAQ8WVF2 138 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 NTAN1Q96AB6 310 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 GOLPH3Q9H4A6 298 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 KLHL11Q9NVR0 708 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 SALL4Q9UJQ4 1053 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
CCDC40-205ENST00000571028 MYOFQ9NZM1 2061 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 CEP192Q8TEP8 1941 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 TEX51A0A1B0GUA7 166 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 NPC1O15118 1278 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 DAPK3O43293 454 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 LRIG2O94898 1065 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 RARAP10276 462 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 COMTP21964 271 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 CD70P32970 193 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 PCK1P35558 622 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 TAS2R40P59535 323 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 BNC1Q01954 994 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF177Q13360 481 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-205ENST00000571028 KRT81Q14533 505 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 E2F5Q15329 346 aa13.63□□□□□ -0.23
CCDC40-205ENST00000571028 GEN1Q17RS7 908 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms