RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZC2HC1CQ53FD0 456 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZNF805Q5CZA5 627 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 MDH1BQ5I0G3 518 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PLA2G2CQ5R387 149 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NDUFAF5Q5TEU4 345 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 E4F1Q66K89 784 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 NFRKBQ6P4R8 1299 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 KLHL24Q6TFL4 600 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 USP45Q70EL2 814 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZNF771Q7L3S4 317 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 TAS2R42Q7RTR8 314 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SPATA21Q7Z572 469 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PACS2Q86VP3 889 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GATAD2AQ86YP4 633 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HID1Q8IV36 788 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HERC6Q8IVU3 1022 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SCN4BQ8IWT1 228 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ALDH16A1Q8IZ83 802 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 DAW1Q8N136 415 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CARFQ8N187 725 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PLD6Q8N2A8 252 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 FBXW8Q8N3Y1 598 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CSGALNACT2Q8N6G5 542 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ARFGAP2Q8N6H7 521 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 RTL3Q8N8U3 475 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 FAM133AQ8N9E0 248 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CCDC63Q8NA47 563 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 POMGNT2Q8NAT1 580 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CAGE1Q8TC20 777 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GANCQ8TET4 914 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SCFD2Q8WU76 684 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 METTL21AQ8WXB1 218 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 KLHL6Q8WZ60 621 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 JADE3Q92613 823 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SYN2Q92777 582 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 INPP5DQ92835 1189 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 COPS5Q92905 334 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PTPRN2Q92932 1015 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 HDAC10Q969S8 669 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZNF566Q969W8 418 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SIPA1Q96FS4 1042 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SNF8Q96H20 258 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NLRP4Q96MN2 994 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 FIZ1Q96SL8 496 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CDK5RAP1Q96SZ6 601 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 EIF3CQ99613 913 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 LRFN3Q9BTN0 628 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NUSAP1Q9BXS6 441 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 TEX12Q9BXU0 123 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ITPAQ9BY32 194 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GPR63Q9BZJ6 419 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CD244Q9BZW8 370 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ZCCHC2Q9C0B9 1178 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 SPATC1LQ9H0A9 340 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 AP5M1Q9H0R1 490 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NOL6Q9H6R4 1146 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 LRRC19Q9H756 370 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 WDR26Q9H7D7 661 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 MRPL44Q9H9J2 332 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 UCK1Q9HA47 277 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SARS2Q9NP81 518 aaKnown RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 NRIP3Q9NQ35 241 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 GPRC5CQ9NQ84 441 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PFDN4Q9NQP4 134 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SNX15Q9NRS6 342 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 DZANK1Q9NVP4 752 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 POLR3BQ9NW08 1133 aaPredicted RBP3.64□□□□□ -1.83
SMG6-208ENST00000570874 EHD2Q9NZN4 543 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TRPM5Q9NZQ8 1165 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SELENONQ9NZV5 590 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 C5AR2Q9P296 337 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 CFAP97Q9P2B7 532 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 ITGA11Q9UKX5 1188 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SLC39A10Q9ULF5 831 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TBX20Q9UMR3 447 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PCDHB10Q9UN67 800 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 LIPT1Q9Y234 373 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TNFSF13BQ9Y275 285 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NAALAD2Q9Y3Q0 740 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SAMM50Q9Y512 469 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TRPV2Q9Y5S1 764 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 SNX9Q9Y5X1 595 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 NPFFR2Q9Y5X5 522 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PMF1-BGLAPU3KQ54 211 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 MYO16Q9Y6X6 1858 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 MYPNQ86TC9 1320 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 PTPRDP23468 1912 aa3.64□□□□□ -1.83
SMG6-208ENST00000570874 TSC2P49815 1807 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCL15-CCL14A0A0B4J2E2 113 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 A0A1B0GUA9 196 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 A4D1N5 150 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TTLL8A6PVC2 850 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TARM1B6A8C7 271 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 BTBD19C9JJ37 291 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CXCL11O14625 94 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KIAA0355O15063 1070 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 FANCGO15287 622 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ZSCAN12O43309 604 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CACNG3O60359 315 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms