RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 TEKT4Q8WW24 435 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 OMDQ99983 421 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 NEUROG2Q9H2A3 272 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 C6orf106Q9H6K1 298 aaPredicted RBP11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 CWC15Q9P013 229 aaKnown RBP11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 CTTNBP2NLQ9P2B4 639 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.3□□□□□ -0.6
SHCBP1-207ENST00000569702 CACNA1EQ15878 2313 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 LNP1A1A4G5 178 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 PROSCO94903 275 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 SERPINF2P08697 491 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 ERCC2P18074 760 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 SDHBP21912 280 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 MAOBP27338 520 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 CHRNA3P32297 505 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 ID4P47928 161 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 LIMK1P53667 647 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 IRX4P78413 519 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 SERINC3Q13530 473 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 DPYSQ14117 519 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 DUOXA1Q1HG43 343 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 SMTNL2Q2TAL5 461 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 AASDHQ4L235 1098 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 PPP6R3Q5H9R7 873 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 DCAF12L1Q5VU92 463 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 DPY19L3Q6ZPD9 716 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 POLNQ7Z5Q5 900 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 RABEPKQ7Z6M1 372 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 RGL4Q8IZJ4 473 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 CHST14Q8NCH0 376 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 PIP4K2CQ8TBX8 421 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 FAM71BQ8TC56 605 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 VOPP1Q96AW1 172 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 TNKS2Q9H2K2 1166 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 CAPN10Q9HC96 672 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 LCMT1Q9UIC8 334 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 INTUQ9ULD6 942 aa11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
SHCBP1-207ENST00000569702 MEI4A8MW99 385 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 RNF103O00237 685 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 SLC7A4O43246 635 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 DAPK3O43293 454 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 BUB1O43683 1085 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 BNIP3LO60238 219 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 MTA2O94776 668 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 LCA5LO95447 670 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 PRNPP04156 253 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 IGHV4-34P06331 123 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 FECHP22830 423 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 IL4RP24394 825 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 MAN1A1P33908 653 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 RECQLP46063 649 aaPredicted RBP11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 ARSEP51690 589 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 ADPRHP54922 357 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 CARD16Q5EG05 197 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 NCEH1Q6PIU2 408 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 CPNE8Q86YQ8 564 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 ARHGAP12Q8IWW6 846 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 NPWQ8N729 165 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 OR2T34Q8NGX1 318 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 GANCQ8TET4 914 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 TSC1Q92574 1164 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 HSPH1Q92598 858 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 BIRC7Q96CA5 298 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 ORAI3Q9BRQ5 295 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 ZWILCHQ9H900 591 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 PDFQ9HBH1 243 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 SUSD2Q9UGT4 822 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 SLC6A14Q9UN76 642 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 WASF2Q9Y6W5 498 aa11.28□□□□□ -0.6
SHCBP1-207ENST00000569702 A0A1B0GTW7 788 aa11.27□□□□□ -0.61
SHCBP1-207ENST00000569702 LRRC72A6NJI9 287 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms