RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 OASLQ15646 514 aaKnown RBP23.88■■□□□ 1.41
RAB40C-212ENST00000569575 SERPINA13PQ6UXR4 307 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 TP53INP2Q8IXH6 220 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 PRELID2Q8N945 189 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 PJA1Q8NG27 643 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 ATL2Q8NHH9 583 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 GRK7Q8WTQ7 553 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 EZH1Q92800 747 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-212ENST00000569575 IL12RB2Q99665 862 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 LMAN1LQ9HAT1 526 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 SIT1Q9Y3P8 196 aa23.88■■□□□ 1.41
RAB40C-212ENST00000569575 FARP1Q9Y4F1 1045 aaPredicted RBP23.88■■□□□ 1.41
RAB40C-212ENST00000569575 EDDM13A0A1B0GTR0 161 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 PHF2O75151 1096 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 CD160O95971 181 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 GSRP00390 522 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 MMP13P45452 471 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 CLCN5P51795 746 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 SNRPD1P62314 119 aaKnown RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 GRM3Q14832 879 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 DLG2Q15700 870 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 HNRNPA1L2Q32P51 320 aaKnown RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 FNDC3BQ53EP0 1204 aaKnown RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 TEX44Q53QW1 395 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 BMP8AQ7Z5Y6 402 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 CHPFQ8IZ52 775 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 MAGOHBQ96A72 148 aaKnown RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 RTP4Q96DX8 246 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 MYO19Q96H55 970 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 LRIG1Q96JA1 1093 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 CAPZA3Q96KX2 299 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 GABRG3Q99928 467 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 CINPQ9BW66 212 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 DNPEPQ9ULA0 475 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 ZNF148Q9UQR1 794 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 MRFAP1Q9Y605 127 aa23.87■■□□□ 1.41
RAB40C-212ENST00000569575 MYO18AQ92614 2054 aaKnown RBP23.87■■□□□ 1.41
RAB40C-212ENST00000569575 STK25O00506 426 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 ALOX15BO15296 676 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 CD72P21854 359 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 GLDCP23378 1020 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 RECQLP46063 649 aaPredicted RBP23.86■■□□□ 1.41
RAB40C-212ENST00000569575 ZNF235Q14590 738 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 DNTTIP2Q5QJE6 756 aaKnown RBP23.86■■□□□ 1.41
RAB40C-212ENST00000569575 ARHGAP36Q6ZRI8 547 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 ADAT2Q7Z6V5 191 aaKnown RBP23.86■■□□□ 1.41
RAB40C-212ENST00000569575 CYB5D2Q8WUJ1 264 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 C1orf54Q8WWF1 131 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 RPL10LQ96L21 214 aaKnown RBP23.86■■□□□ 1.41
RAB40C-212ENST00000569575 USP29Q9HBJ7 922 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 SLCO3A1Q9UIG8 710 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 R3HDM2Q9Y2K5 976 aaKnown RBP23.86■■□□□ 1.41
RAB40C-212ENST00000569575 STON1Q9Y6Q2 735 aa23.86■■□□□ 1.41
RAB40C-212ENST00000569575 C5orf60A6NFR6 353 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 RNF40O75150 1001 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 TMCC1O94876 653 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 MAP3K6O95382 1288 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 MT-CO1P00395 513 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 CHRM1P11229 460 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-212ENST00000569575 ACTN2P35609 894 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 CTSOP43234 321 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-212ENST00000569575 RAD51Q06609 339 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 SLC10A7Q0GE19 358 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 FZD5Q13467 585 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 STARD3Q14849 445 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 ACCSLQ4AC99 568 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 EGFLAMQ63HQ2 1017 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 ALG1LQ6GMV1 187 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 C22orf39Q6P5X5 142 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 LINGO4Q6UY18 593 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 IL17RCQ8NAC3 791 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 FRS2Q8WU20 508 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 SLCO2A1Q92959 643 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 GDAP1L1Q96MZ0 367 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 POLR1EQ9GZS1 481 aaKnown RBP23.85■■□□□ 1.41
RAB40C-212ENST00000569575 CHRDQ9H2X0 955 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 RBM22Q9NW64 420 aaKnown RBP eCLIP23.85■■□□□ 1.41
RAB40C-212ENST00000569575 SHROOM3Q8TF72 1996 aa23.85■■□□□ 1.41
RAB40C-212ENST00000569575 TMEM221A6NGB7 291 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 M0R296 226 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 OPHN1O60890 802 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 GCATO75600 419 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 C7P10643 843 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 RBL1P28749 1068 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 TIE1P35590 1138 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 RHOAP61586 193 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 CYTH1Q15438 398 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 SLC14A2Q15849 920 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 P3H1Q32P28 736 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 ITPRIPL1Q6GPH6 555 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 SYT13Q7L8C5 426 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 DSG4Q86SJ6 1040 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 CCDC105Q8IYK2 499 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 CEP112Q8N8E3 955 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 OR2AP1Q8NGE2 309 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 SORCS1Q8WY21 1168 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 TEKT5Q96M29 485 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 MGME1Q9BQP7 344 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 AP1M1Q9BXS5 423 aa23.84■■□□□ 1.41
RAB40C-212ENST00000569575 PCYOX1Q9UHG3 505 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms