RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 HAPLN3Q96S86 360 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 SPON2Q9BUD6 331 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 HDAC8Q9BY41 377 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 ZYG11BQ9C0D3 744 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 TMPRSS4Q9NRS4 437 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.17
CNOT1-215ENST00000569020 ARID1BQ8NFD5 2236 aaPredicted RBP13.96□□□□□ -0.17
CNOT1-215ENST00000569020 SHROOM3Q8TF72 1996 aa13.96□□□□□ -0.18
CNOT1-215ENST00000569020 CHD5Q8TDI0 1954 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 FAM170AA1A519 330 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 GOLGA8SH3BPF8 625 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 SIGLEC6O43699 453 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 LEFTY1O75610 366 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 LSM8O95777 96 aaKnown RBP13.95□□□□□ -0.18
CNOT1-215ENST00000569020 GLDCP23378 1020 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
CNOT1-215ENST00000569020 NEK3P51956 506 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 E2F1Q01094 437 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 SEMG2Q02383 582 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 SLC20A2Q08357 652 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ZNF211Q13398 564 aaPredicted RBP13.95□□□□□ -0.18
CNOT1-215ENST00000569020 RTP5Q14D33 572 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ZNF284Q2VY69 593 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 DPY19L2P1Q6NXN4 242 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 LRRC69Q6ZNQ3 347 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 DPY19L3Q6ZPD9 716 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 CACTIN-AS1Q8N1I8 211 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 CFAP57Q96MR6 1250 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 CEP44Q9C0F1 390 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ATP13A1Q9HD20 1204 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 FZD3Q9NPG1 666 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 KLHL11Q9NVR0 708 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
CNOT1-215ENST00000569020 ANKRD11Q6UB99 2663 aaPredicted RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 EIF4E1BA6NMX2 242 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 TRIM38O00635 465 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 ENDOD1O94919 500 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 ALPPL2P10696 532 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 UCHL3P15374 230 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 DGKAP23743 735 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 EIF2S3P41091 472 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 SERPINH1P50454 418 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 GNA12Q03113 381 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 DPCR1Q3MIW9 517 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 ARL13BQ3SXY8 428 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 C2CD6Q53TS8 623 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 ARCQ7LC44 396 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 DCP2Q8IU60 420 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 SLC25A45Q8N413 288 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 PCDH20Q8N6Y1 951 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 OR13H1Q8NG92 308 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 OR4C6Q8NH72 309 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 RFFLQ8WZ73 363 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 HEPHQ9BQS7 1158 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 STK33Q9BYT3 514 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 TMEM59LQ9UK28 342 aa13.94□□□□□ -0.18
CNOT1-215ENST00000569020 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
CNOT1-215ENST00000569020 KNTC1P50748 2209 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 NEMP2A6NFY4 417 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 A6NNZ2 444 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 RNF103O00237 685 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 FFAR2O15552 330 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 RRP8O43159 456 aaKnown RBP13.93□□□□□ -0.18
CNOT1-215ENST00000569020 PIAS2O75928 621 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 MMEP08473 750 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ADRB3P13945 408 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ITGB7P26010 798 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 L1CAMP32004 1257 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ETFBP38117 255 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 DNA2P51530 1060 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 CLDN2P57739 230 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 RPS21P63220 83 aaKnown RBP13.93□□□□□ -0.18
CNOT1-215ENST00000569020 NOMO3P69849 1222 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ARF5P84085 180 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ATP11AP98196 1134 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 INSM1Q01101 510 aaPredicted RBP13.93□□□□□ -0.18
CNOT1-215ENST00000569020 KIAA1161Q6NSJ0 714 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 TRNP1Q6NT89 227 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 GCNT7Q6ZNI0 430 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 BNIPLQ7Z465 357 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ABI3BPQ7Z7G0 1075 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ZSCAN30Q86W11 494 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 DRC7Q8IY82 874 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 EPS8L1Q8TE68 723 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 BAP1Q92560 729 aa13.93□□□□□ -0.18
CNOT1-215ENST00000569020 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms