RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 TEAD4Q15561 434 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 N4BP2L1Q5TBK1 243 aaPredicted RBP17.89■□□□□ 0.45
EDC3-215ENST00000569007 AGBL4Q5VU57 503 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 LAYNQ6UX15 382 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 DPY19L3Q6ZPD9 716 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 PIP4P1Q86T03 277 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 VPS36Q86VN1 386 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 ARFGAP1Q8N6T3 406 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 GRIN3AQ8TCU5 1115 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 NOL6Q9H6R4 1146 aaKnown RBP17.89■□□□□ 0.45
EDC3-215ENST00000569007 EBF2Q9HAK2 575 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 PCSK1NQ9UHG2 260 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 FCF1Q9Y324 198 aaKnown RBP17.89■□□□□ 0.45
EDC3-215ENST00000569007 SCINQ9Y6U3 715 aa17.89■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3DA0A087WVF3 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3IA0A087WXS9 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3EA0A087X179 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3KA0A087X1G2 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 A0A1W2PPC4 97 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3FA6NER0 549 aaPredicted RBP17.88■□□□□ 0.45
EDC3-215ENST00000569007 UPK3BL1B0FP48 263 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3LB9A6J9 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 UPK3BL2E5RIL1 263 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 RNF103O00237 685 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 PRNPP04156 253 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3HP0C7X1 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 CEACAM1P13688 526 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 CD59P13987 128 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 CASP14P31944 242 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 GRIA4P48058 902 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 PPP2CBP62714 309 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 PPP2CAP67775 309 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 KIF19Q2TAC6 998 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 ARSIQ5FYB1 569 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3GQ6DHY5 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3CQ6IPX1 549 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 LEKR1Q6ZMV7 388 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TBC1D3Q8IZP1 549 aaPredicted RBP17.88■□□□□ 0.45
EDC3-215ENST00000569007 PCDH20Q8N6Y1 951 aaKnown RBP17.88■□□□□ 0.45
EDC3-215ENST00000569007 TMIEQ8NEW7 156 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 FNIP1Q8TF40 1166 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 SLC6A18Q96N87 628 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 PEBP4Q96S96 227 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 DHX35Q9H5Z1 703 aaKnown RBP17.88■□□□□ 0.45
EDC3-215ENST00000569007 GAREM1Q9H706 876 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 IL21RQ9HBE5 538 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
EDC3-215ENST00000569007 IL36AQ9UHA7 158 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 HPCAL4Q9UM19 191 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 AP4E1Q9UPM8 1137 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 CHD8Q9HCK8 2581 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 CHD5Q8TDI0 1954 aa17.88■□□□□ 0.45
EDC3-215ENST00000569007 TPRP12270 2363 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 A0A087X0T9 212 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 CXorf51AA0A1B0GTR3 108 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 PLRG1O43660 514 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 RNF8O76064 485 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 FAM228BP0C875 321 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 MIPP30301 263 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 GEMIN4P57678 1058 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 TPI1P60174 286 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 RACK1P63244 317 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 CA9Q16790 459 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 HLA-BQ31612 363 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 CARD16Q5EG05 197 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 IL27RAQ6UWB1 636 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 ZNF354CQ86Y25 554 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 RNF214Q8ND24 703 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 SNRNP25Q9BV90 132 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 TM6SF2Q9BZW4 377 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 KDM4CQ9H3R0 1056 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 CATSPERBQ9H7T0 1116 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 ANKRD6Q9Y2G4 727 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 FNDC3AQ9Y2H6 1198 aaKnown RBP17.87■□□□□ 0.45
EDC3-215ENST00000569007 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.87■□□□□ 0.45
EDC3-215ENST00000569007 SNX11Q9Y5W9 270 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 WASF2Q9Y6W5 498 aa17.87■□□□□ 0.45
EDC3-215ENST00000569007 ACACBO00763 2458 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 WASH4PA8MWX3 477 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 FGF10O15520 208 aaPredicted RBP17.86■□□□□ 0.45
EDC3-215ENST00000569007 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 LATO43561 262 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 KDELR3O43731 214 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 PRPSAP2O60256 369 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 LRCH4O75427 683 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 LEFTY1O75610 366 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 CER1O95813 267 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 HTR7P34969 479 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 CCNHP51946 323 aaPredicted RBP17.86■□□□□ 0.45
EDC3-215ENST00000569007 YBEYP58557 167 aaPredicted RBP17.86■□□□□ 0.45
EDC3-215ENST00000569007 TAS2R38P59533 333 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 SLC14A1Q13336 389 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 ERMARDQ5T6L9 678 aa17.86■□□□□ 0.45
EDC3-215ENST00000569007 CYP4V2Q6ZWL3 525 aaPredicted RBP17.86■□□□□ 0.45
EDC3-215ENST00000569007 ADAT2Q7Z6V5 191 aaKnown RBP17.86■□□□□ 0.45
EDC3-215ENST00000569007 UMODL1-AS1Q8N2C9 162 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms