RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KIAA1161Q6NSJ0 714 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 FOXR1Q6PIV2 292 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 WDR48Q8TAF3 677 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 BMFQ96LC9 184 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 CCNL2Q96S94 520 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 C2orf49Q9BVC5 232 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 MUC3BQ9H195 1237 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 IL17BQ9UHF5 180 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 SALL4Q9UJQ4 1053 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 ATXN7L1Q9ULK2 861 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 VANGL2Q9ULK5 521 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 HS3ST3A1Q9Y663 406 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 BSNQ9UPA5 3926 aa12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 NYNRINQ9P2P1 1898 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-209ENST00000568569 SYNJ2BP-COX16A0A087WUM0 186 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 POM121BA6NF01 834 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 TPP1O14773 563 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 AQP9O43315 295 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 MT-CO1P00395 513 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 RPIAP49247 311 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 IRAK1P51617 712 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 CLCN6P51797 869 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 NEK3P51956 506 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 CDH4P55283 916 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 KRT85P78386 507 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 LRRC63Q05C16 580 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 DEFB133Q30KQ1 61 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 COBLL1Q53SF7 1204 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 DENND1BQ6P3S1 775 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 CRTC1Q6UUV9 634 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 XKR5Q6UX68 686 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 TMEM110Q86TL2 294 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 NAT6Q93015 286 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 SNX21Q969T3 373 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 SLC17A9Q9BYT1 436 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 TRIM4Q9C037 500 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 COX16Q9P0S2 106 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 IL36AQ9UHA7 158 aa12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-209ENST00000568569 TLN1Q9Y490 2541 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 CCDC187A0A096LP49 1063 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 PMS2P1A4D2B8 440 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 K7ERQ8 282 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 MUSKO15146 869 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 P4HA2O15460 535 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 MED7O43513 233 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 SNAP91O60641 907 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 ZNF202O95125 648 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 PAK4O96013 591 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 GLI1P08151 1106 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 KRT5P13647 590 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 JUNDP17535 347 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 RRM1P23921 792 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 RECQLP46063 649 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 PDCLQ13371 301 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 PDE1CQ14123 709 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 FGL2Q14314 439 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 ZNF658Q5TYW1 1059 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 DCAF4L2Q8NA75 395 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 CHST14Q8NCH0 376 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 LMO3Q8TAP4 145 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 BTN2A2Q8WVV5 523 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 GLMNQ92990 594 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 SLC2A13Q96QE2 648 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 PSMB7Q99436 277 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 VPS51Q9UID3 782 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 KLF15Q9UIH9 416 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 HS3ST4Q9Y661 456 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 DOCK9Q9BZ29 2069 aa12.06□□□□□ -0.48
GTF3C1-209ENST00000568569 UBR5O95071 2799 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 A0A1W2PQ27 194 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 A0A1W2PQ64 194 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 TRIM49BA6NDI0 452 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 RNF103O00237 685 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 FPGTO14772 594 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 RAD51BO15315 384 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 HSF2BPO75031 334 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 LEFTY1O75610 366 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 RHOCP08134 193 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 ADRB3P13945 408 aa12.05□□□□□ -0.48
GTF3C1-209ENST00000568569 GGCXP38435 758 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms