RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MT-CO1P00395 513 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PRNPP04156 253 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PLEKP08567 350 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RHOQP17081 205 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 DESP17661 470 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GPD1P21695 349 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GLDCP23378 1020 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RRM1P23921 792 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CD38P28907 300 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CHRNA3P32297 505 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RFC1P35251 1148 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 CTSKP43235 329 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GRK6P43250 576 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RECQLP46063 649 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 MAPKAPK2P49137 400 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ZNF165P49910 485 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SERPINH1P50454 418 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 CCT8P50990 548 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 METAP1P53582 386 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 AIF1P55008 147 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 HDAC4P56524 1084 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 C21orf59P57076 290 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GEMIN4P57678 1058 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 FAM193AP78312 1265 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 GNA12Q03113 381 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SLC20A2Q08357 652 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SCAPQ12770 1279 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CNTN1Q12860 1018 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SUZ12Q15022 739 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 INAVAQ3KP66 663 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SETMARQ53H47 684 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 RAB6CQ53S08 254 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 MANEALQ5VSG8 457 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 AGBL4Q5VU57 503 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3GQ6DHY5 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ACAD10Q6JQN1 1059 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RETSATQ6NUM9 610 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RWDD4Q6NW29 188 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 NEK5Q6P3R8 708 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 DNAJC24Q6P3W2 148 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 C22orf39Q6P5X5 142 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 WDR59Q6PJI9 974 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 LAYNQ6UX15 382 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 LINGO4Q6UY18 593 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 IRF2BP2Q7Z5L9 587 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RAB44Q7Z6P3 723 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 SLFN11Q7Z7L1 901 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PHLDB2Q86SQ0 1253 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PRPF39Q86UA1 669 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 NLRP14Q86W24 1093 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TRIM69Q86WT6 500 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 DRC7Q8IY82 874 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 PCDH20Q8N6Y1 951 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 CCDC185Q8N715 623 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TMIEQ8NEW7 156 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ANKK1Q8NFD2 765 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 OR7D4Q8NG98 312 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 OR2A12Q8NGT7 310 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SETD7Q8WTS6 366 aaKnown RBP4.89□□□□□ -1.63
CLK3-219ENST00000567805 BAP1Q92560 729 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 NTAN1Q96AB6 310 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TBC1D31Q96DN5 1066 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PPP1R16AQ96I34 528 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 VCPIP1Q96JH7 1222 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SERAC1Q96JX3 654 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SLC6A18Q96N87 628 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CAMK1GQ96NX5 476 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 MCEEQ96PE7 176 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CDC6Q99741 560 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CNPY3Q9BT09 278 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SPON2Q9BUD6 331 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 SCNM1Q9BWG6 230 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 CEP44Q9C0F1 390 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 RAB6CQ9H0N0 254 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 MAGEH1Q9H213 219 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 EBF2Q9HAK2 575 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ATP13A1Q9HD20 1204 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 DYRK4Q9NR20 520 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 AASDHPPTQ9NRN7 309 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 TMEM248Q9NWD8 314 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 ARHGAP20Q9P2F6 1191 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 IL36AQ9UHA7 158 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 PCOLCE2Q9UKZ9 415 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 HPCAL4Q9UM19 191 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 NEU3Q9UQ49 428 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 DMTF1Q9Y222 760 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 NEUROG3Q9Y4Z2 214 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 LRRK1Q38SD2 2015 aa4.89□□□□□ -1.63
CLK3-219ENST00000567805 A0A1B0GTH6 734 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 A0A1B0GTQ1 180 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 A0A1W2PR77 199 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 FAM221BA6H8Z2 402 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 TMEM8BA6NDV4 472 aa4.88□□□□□ -1.63
CLK3-219ENST00000567805 ZSCAN5CA6NGD5 496 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms