RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 HTRA2O43464 458 aaPredicted RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 JUNP05412 331 aaKnown RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 VARSP26640 1264 aaKnown RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ENTPD1P49961 510 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM132AQ24JP5 1023 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ELMSAN1Q6PJG2 1045 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 OR52K1Q8NGK4 314 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ZSCAN18Q8TBC5 510 aaPredicted RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 STYXQ8WUJ0 223 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 RSPH1Q8WYR4 309 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 C12orf42Q96LP6 360 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 B3GNT5Q9BYG0 378 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 SEMA6AQ9H2E6 1030 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 DUS2Q9NX74 493 aaKnown RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 KANSL1LA0AUZ9 987 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 TARM1B6A8C7 271 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 MCF2P10911 925 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 DNAJB1P25685 340 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ARL4AP40617 200 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 PHKA2P46019 1235 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 IFRD2Q12894 506 aaPredicted RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 MPP3Q13368 585 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ZBED5Q49AG3 693 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 NHSL2Q5HYW2 709 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 TREML2Q5T2D2 321 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 NXNQ6DKJ4 435 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 KRT80Q6KB66 452 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 HMBOX1Q6NT76 420 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 GPR180Q86V85 440 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 PELI3Q8N2H9 469 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ANKFN1Q8N957 763 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 KDM1BQ8NB78 822 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ACVR1CQ8NER5 493 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 CASS4Q9NQ75 786 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 C20orf96Q9NUD7 363 aaPredicted RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 ADA2Q9NZK5 511 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 PTBP2Q9UKA9 531 aaKnown RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 SNX9Q9Y5X1 595 aa15.92■□□□□ 0.14
COMMD4-215ENST00000566843 TRIM64A6NGJ6 449 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TK2O00142 265 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PLOD2O00469 737 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 CBFA2T3O75081 653 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TCN1P20061 433 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-215ENST00000566843 RBP5P82980 135 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TNFAIP2Q03169 654 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PPP4R4Q6NUP7 873 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 HERC6Q8IVU3 1022 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 MYO1HQ8N1T3 1032 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PYROXD2Q8N2H3 581 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 VPS39Q96JC1 886 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 MARK4Q96L34 752 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PGLYRP2Q96PD5 576 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 GPR22Q99680 433 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TRPV6Q9H1D0 765 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TASP1Q9H6P5 420 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 FZD10Q9ULW2 581 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 A0A087WXM4 84 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 E7ENX8 843 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 SDHDO14521 159 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 DDHD2O94830 711 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 ABCG1P45844 678 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 ACADVLP49748 655 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 GTF2A2P52657 109 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 NAGLUP54802 743 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PPIL2Q13356 520 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 TNFAIP1Q13829 316 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 LRP8Q14114 963 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 ANO4Q32M45 955 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 SLC10A6Q3KNW5 377 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 MTX3Q5HYI7 312 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 RWDD4Q6NW29 188 aaKnown RBP15.91■□□□□ 0.14
COMMD4-215ENST00000566843 CHSY3Q70JA7 882 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 STRADAQ7RTN6 431 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 GPR141Q7Z602 305 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
COMMD4-215ENST00000566843 LPGAT1Q92604 370 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 ISOC1Q96CN7 298 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 CEP41Q9BYV8 373 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 ACSS2Q9NR19 701 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 BFARQ9NZS9 450 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 CD300AQ9UGN4 299 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 VANGL2Q9ULK5 521 aa15.91■□□□□ 0.14
COMMD4-215ENST00000566843 DOCK1Q14185 1865 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 KCNU1A8MYU2 1149 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 CSPG5O95196 566 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 AP2A1O95782 977 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 F7P08709 466 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-215ENST00000566843 NELFEP18615 380 aaKnown RBP15.9■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM132DQ14C87 1099 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 GK5Q6ZS86 529 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 TFAP2CQ92754 450 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 VPS50Q96JG6 964 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 PCDHAC1Q9H158 963 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 ARHGEF38Q9NXL2 777 aa15.9■□□□□ 0.14
COMMD4-215ENST00000566843 HEATR9A2RTY3 570 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 TRPC5OSA6NMA1 111 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 IQCF3P0C7M6 154 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CYP2C8P10632 490 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms