RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 NFIL3Q16649 462 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 METTL11BQ5VVY1 283 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 TMEM270Q6UE05 265 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ANKS4BQ8N8V4 417 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ANKRD53Q8N9V6 530 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ZNF671Q8TAW3 534 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 SLC22A18Q96BI1 424 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 C3orf49Q96BT1 292 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 TXN2Q99757 166 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 DDX50Q9BQ39 737 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 NT5C3AQ9H0P0 336 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 NCOR1P1Q9H4R4 102 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ANKZF1Q9H8Y5 726 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 RPH3AQ9Y2J0 694 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MACROD2A1Z1Q3 448 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MANSC4A6NHS7 340 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 GPR89AB7ZAQ6 455 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ZNF263O14978 683 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 PGRMC2O15173 223 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 STAMBPO95630 424 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 GPR89BP0CG08 455 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 CYP11B2P19099 503 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MAOBP27338 520 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 CCR1P32246 355 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 PAFAH1B1P43034 410 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 NPY4RP50391 375 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 CRY1Q16526 586 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC40Q4G0X9 1142 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 ARHGAP36Q6ZRI8 547 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 TTC25Q96NG3 672 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 PNKPQ96T60 521 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 MAK16Q9BXY0 300 aaKnown RBP10.92□□□□□ -0.66
UBFD1-205ENST00000566136 PRDM14Q9GZV8 571 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 TMEM165Q9HC07 324 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
UBFD1-205ENST00000566136 LRRC53A6NM62 1247 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 DNM1LO00429 736 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SYN3O14994 580 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SLCO2B1O94956 709 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 PRKCBP05771 671 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ANXA2P07355 339 aaKnown RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CAPZA2P47755 286 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 HDAC4P56524 1084 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 KRT17Q04695 432 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 MGAT5Q09328 741 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 GAS6Q14393 721 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 RAB11FIP2Q7L804 512 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC65Q8IXS2 484 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 DPP10Q8N608 796 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 NOA1Q8NC60 698 aaKnown RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ACER1Q8TDN7 264 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 LENG9Q96B70 501 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 DTNBP1Q96EV8 351 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC42Q96M95 316 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 RNF32Q9H0A6 362 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 TM9SF3Q9HD45 589 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SEPT10Q9P0V9 454 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 MTO1Q9Y2Z2 717 aaKnown RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CYP3A7-CYP3A51PA0A087WV96 503 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 A0A1W2PQJ5 194 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 EIF3CLB5ME19 914 aaKnown RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 DIRAS3O95661 229 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ACTN1P12814 892 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CYP3A7P24462 503 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SLC5A3P53794 718 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ATXN3P54252 364 aaPredicted RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 PMP22Q01453 160 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SPIRE1Q08AE8 756 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ZCWPW2Q504Y3 356 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SH3RF2Q8TEC5 729 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CRYGNQ8WXF5 182 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 CFHR4Q92496 578 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 EIF3CQ99613 913 aaKnown RBP10.91□□□□□ -0.66
UBFD1-205ENST00000566136 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 DPH5Q9H2P9 285 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 BCAS3Q9H6U6 928 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 PNPOQ9NVS9 261 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 SRRDQ9UH36 339 aa10.91□□□□□ -0.66
UBFD1-205ENST00000566136 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms