RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PLA2G4CQ9UP65 541 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
SF3B3-206ENST00000565990 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 J3KR12 359 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 ATP9BO43861 1147 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 MFSD11O43934 449 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 SNAP91O60641 907 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 PRAMEF11O60813 436 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 RNF40O75150 1001 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 MT-CO1P00395 513 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 MX2P20592 715 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 GLDCP23378 1020 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 CXCR5P32302 372 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 GARSP41250 739 aaKnown RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 IL10RBQ08334 325 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 XRCC4Q13426 336 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 LRRC32Q14392 662 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 NETO2Q8NC67 525 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 ACTRT1Q8TDG2 376 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 P3H4Q92791 437 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 GABRG3Q99928 467 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 IPO11Q9UI26 975 aaKnown RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 SLCO3A1Q9UIG8 710 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
SF3B3-206ENST00000565990 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
SF3B3-206ENST00000565990 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 GOLGA6BA6NDN3 693 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CCDC188H7C350 402 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CBX4O00257 560 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 PI15O43692 258 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CEP104O60308 925 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 SYF2O95926 243 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 PDGFBP01127 241 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 AOC1P19801 751 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 DNA2P51530 1060 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 GEMIN4P57678 1058 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 GAS6Q14393 721 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ZNF234Q14588 700 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 PDK1Q15118 436 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 NOMO1Q15155 1222 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 EGFLAMQ63HQ2 1017 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 C8orf74Q6P047 294 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ARHGAP36Q6ZRI8 547 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 SH2D3CQ8N5H7 860 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 TEX26Q8N6G2 289 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 IL17RCQ8NAC3 791 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CAPZA3Q96KX2 299 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 RPL10LQ96L21 214 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ZNF599Q96NL3 588 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 ACOX2Q99424 681 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 CIPCQ9C0C6 399 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 GDF3Q9NR23 364 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
SF3B3-206ENST00000565990 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
SF3B3-206ENST00000565990 HACD1B0YJ81 288 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 WASH3PC4AMC7 463 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 DFFAO00273 331 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 MATN3O15232 486 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 ADAM23O75077 832 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 ATG13O75143 517 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 FGGP02679 453 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 SRCP12931 536 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 NTSR1P30989 418 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 TIE1P35590 1138 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 MAGEA9P43362 315 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 SERPINH1P50454 418 aaKnown RBP12.85□□□□□ -0.35
SF3B3-206ENST00000565990 DYNLT1P63172 113 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 SKOR1P84550 965 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
SF3B3-206ENST00000565990 HNRNPDQ14103 355 aaKnown RBP12.85□□□□□ -0.35
SF3B3-206ENST00000565990 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-206ENST00000565990 CYTH1Q15438 398 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
SF3B3-206ENST00000565990 TRMT11Q7Z4G4 463 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms