RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ARRB1P49407 418 aaPredicted RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 SERPINH1P50454 418 aaKnown RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 IL9RQ01113 521 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 SHBQ15464 509 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 NEK5Q6P3R8 708 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 PHLDB2Q86SQ0 1253 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 OXR1Q8N573 874 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 PCDH20Q8N6Y1 951 aaKnown RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 C3orf20Q8ND61 904 aa20.31■□□□□ 0.84
CLN6-206ENST00000565471 COL5A1P20908 1838 aaPredicted RBP20.31■□□□□ 0.84
CLN6-206ENST00000565471 RNGTTO60942 597 aaKnown RBP20.3■□□□□ 0.84
CLN6-206ENST00000565471 ZNF821O75541 412 aaPredicted RBP20.3■□□□□ 0.84
CLN6-206ENST00000565471 RHOQP17081 205 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 MAT2AP31153 395 aaKnown RBP20.3■□□□□ 0.84
CLN6-206ENST00000565471 HDAC4P56524 1084 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 ARF5P84085 180 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 PRAMEF14Q5SWL7 426 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 CCNI2Q6ZMN8 369 aaPredicted RBP20.3■□□□□ 0.84
CLN6-206ENST00000565471 NLRP14Q86W24 1093 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 DRC7Q8IY82 874 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 CHST14Q8NCH0 376 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 SAP25Q8TEE9 199 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 FAM172AQ8WUF8 416 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 NTAN1Q96AB6 310 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 ARRDC3Q96B67 414 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 PPP1R16AQ96I34 528 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 SELENOOQ9BVL4 669 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 HDAC8Q9BY41 377 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 DYRK4Q9NR20 520 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 FTSJ1Q9UET6 329 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 IL36AQ9UHA7 158 aa20.3■□□□□ 0.84
CLN6-206ENST00000565471 IGF2RP11717 2491 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 CHD5Q8TDI0 1954 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 SIGLEC16A6NMB1 481 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 PRAMEF26H0Y7S4 382 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 GJB6O95452 261 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 ITGAVP06756 1048 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 GPD1P21695 349 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 EPHA8P29322 1005 aaPredicted RBP20.29■□□□□ 0.84
CLN6-206ENST00000565471 RFC1P35251 1148 aaPredicted RBP20.29■□□□□ 0.84
CLN6-206ENST00000565471 RXRGP48443 463 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 C1QBPQ07021 282 aaKnown RBP20.29■□□□□ 0.84
CLN6-206ENST00000565471 SCAPQ12770 1279 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 STAT4Q14765 748 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 DPY19L3Q6ZPD9 716 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 ERN2Q76MJ5 926 aaKnown RBP20.29■□□□□ 0.84
CLN6-206ENST00000565471 MON1BQ7L1V2 547 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 TMPRSS7Q7RTY8 843 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 GATAD2AQ86YP4 633 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 AGPAT1Q99943 283 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 TNKS2Q9H2K2 1166 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 TMEM248Q9NWD8 314 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 NEU3Q9UQ49 428 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 WASF2Q9Y6W5 498 aa20.29■□□□□ 0.84
CLN6-206ENST00000565471 PTPRBP23467 1997 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 TCRBV5S1A1TA0A578 114 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 LRIG2O94898 1065 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 CCDC172P0C7W6 258 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 TYRO3Q06418 890 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 ARSIQ5FYB1 569 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 RWDD4Q6NW29 188 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 WDR59Q6PJI9 974 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 SPATS2Q86XZ4 545 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 PLPP6Q8IY26 295 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 TMEM145Q8NBT3 493 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 GRIN3AQ8TCU5 1115 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 ISG20Q96AZ6 181 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 TBC1D31Q96DN5 1066 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 NAT10Q9H0A0 1025 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 MAGEH1Q9H213 219 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 SEPT11Q9NVA2 429 aaKnown RBP20.28■□□□□ 0.84
CLN6-206ENST00000565471 AKAP13Q12802 2813 aa20.28■□□□□ 0.84
CLN6-206ENST00000565471 PLXNB3Q9ULL4 1909 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 A0A1W2PQU0 124 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 FAM72CH0Y354 149 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 RNF103O00237 685 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 LEFTY1O75610 366 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 CD160O95971 181 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 CAPNS1P04632 268 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 PLEKP08567 350 aaPredicted RBP20.27■□□□□ 0.84
CLN6-206ENST00000565471 ATP1A3P13637 1013 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 FERP16591 822 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 ACVRL1P37023 503 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 CARD16Q5EG05 197 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 FAM72AQ5TYM5 149 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 FAM72DQ6L9T8 149 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 HORMAD1Q86X24 394 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 FAM72BQ86X60 149 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 GALNT15Q8N3T1 639 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 AOPEPQ8N6M6 819 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 ARHGEF2Q92974 986 aaKnown RBP20.27■□□□□ 0.84
CLN6-206ENST00000565471 HEPHQ9BQS7 1158 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 NDFIP2Q9NV92 336 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 MYO6Q9UM54 1294 aa20.27■□□□□ 0.84
CLN6-206ENST00000565471 GOLGA8CPA6NN73 597 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 SRRM3A6NNA2 597 aaPredicted RBP20.26■□□□□ 0.83
CLN6-206ENST00000565471 ITGB7P26010 798 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 L1CAMP32004 1257 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms