RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 TBX4P57082 545 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 RPS21P63220 83 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 SGCGQ13326 291 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 C1orf61Q13536 156 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 PDE1CQ14123 709 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 FGL2Q14314 439 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 CAPRIN2Q6IMN6 1127 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 KYAT3Q6YP21 454 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 FAM114A1Q8IWE2 563 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 CFAP52Q8N1V2 620 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 ANKRD52Q8NB46 1076 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 JPH3Q8WXH2 748 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 ERCC4Q92889 916 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 NKD1Q969G9 470 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 RNF34Q969K3 372 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 TBATAQ96M53 351 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 IMPG2Q9BZV3 1241 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 SLC13A1Q9BZW2 595 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 CDH19Q9H159 772 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 LRRN3Q9H3W5 708 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 ZNF768Q9H5H4 540 aaKnown RBP9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 LRRC4Q9HBW1 653 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 PRDM8Q9NQV8 689 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 KLF15Q9UIH9 416 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
VPS9D1-205ENST00000565452 C9orf172C9J069 976 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 SEMA7AO75326 666 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 GCATO75600 419 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 CNTN5O94779 1100 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 SYKP43405 635 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 UBE2HP62256 183 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 DLG2Q15700 870 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 ZACNQ401N2 412 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 DCAF6Q58WW2 860 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 MS4A13Q5J8X5 152 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 PIP5KL1Q5T9C9 394 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 FAXCQ5TGI0 409 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 CNNM4Q6P4Q7 775 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 ELOA2Q8IYF1 753 aaPredicted RBP9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 CEP57L1Q8IYX8 460 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 SDR16C5Q8N3Y7 309 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 TTC39CQ8N584 583 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 ARL10Q8N8L6 244 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 TMIEQ8NEW7 156 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 CCDC74AQ96AQ1 378 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 HAPLN3Q96S86 360 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 PANK2Q9BZ23 570 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 CPEB1Q9BZB8 566 aaKnown RBP9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 TNMDQ9H2S6 317 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 GPR27Q9NS67 375 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 KBTBD4Q9NVX7 518 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 ZFR2Q9UPR6 939 aaKnown RBP9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 HPSEQ9Y251 543 aa9.27□□□□□ -0.93
VPS9D1-205ENST00000565452 ZFHX3Q15911 3703 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 A0A1B0GVL5 298 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 A0A1W2PQM1 296 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 YJEFN3A6XGL0 299 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 EFCAB7A8K855 629 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 E7ENQ6 273 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 AGRPO00253 132 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 KPNA3O00505 521 aaPredicted RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 IKBKBO14920 756 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 ATP9BO43861 1147 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 BNIP3LO60238 219 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 ZNF202O95125 648 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 IGLV3-27P01718 113 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 PRKCGP05129 697 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 LIFP15018 202 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 CD58P19256 250 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 ETV5P41161 510 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 UQCRFS1P47985 274 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 THOP1P52888 689 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 PLK1P53350 603 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 EIF2B5Q13144 721 aaKnown RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 E2F4Q16254 413 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 ZNF394Q53GI3 561 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SEL1L3Q68CR1 1132 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 NADSYN1Q6IA69 706 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SPOPLQ6IQ16 392 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 KIAA1161Q6NSJ0 714 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 EPM2AIP1Q7L775 607 aaPredicted RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 ZSCAN30Q86W11 494 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 NELFCDQ8IXH7 590 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 C12orf56Q8IXR9 622 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 SIX6OS1Q8N1H7 587 aa9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 FSTL5Q8N475 847 aaPredicted RBP9.26□□□□□ -0.93
VPS9D1-205ENST00000565452 PDILTQ8N807 584 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms