RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 IL36AQ9UHA7 158 aa12.55□□□□□ -0.4
SPG7-211ENST00000565370 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
SPG7-211ENST00000565370 CHD5Q8TDI0 1954 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 A0A1W2PPC4 97 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 TMEM191CA6NGB0 347 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 K7ERQ8 282 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TM4SF5O14894 197 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 PLRG1O43660 514 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 KCNK5O95279 499 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 MT-CO1P00395 513 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 IGHV4-34P06331 123 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 ADRB1P08588 477 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 DRD3P35462 400 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 ACVRL1P37023 503 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 DNA2P51530 1060 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 C21orf59P57076 290 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 YBEYP58557 167 aaPredicted RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 RACK1P63244 317 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 ARF5P84085 180 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 OGDHQ02218 1023 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 ACAP1Q15027 740 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 PYROXD2Q8N2H3 581 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 TMIEQ8NEW7 156 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 ISG20Q96AZ6 181 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
SPG7-211ENST00000565370 ISCUQ9H1K1 167 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 PREBQ9HCU5 417 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 AASDHPPTQ9NRN7 309 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 PLXNA2O75051 1894 aa12.54□□□□□ -0.4
SPG7-211ENST00000565370 A0A1B0GVT2 93 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 UPK3BL1B0FP48 263 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 DAPK3O43293 454 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 SMAD6O43541 496 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 CEACAM1P13688 526 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 CASP14P31944 242 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 CCNHP51946 323 aaPredicted RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 NEK3P51956 506 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 CNTN1Q12860 1018 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 INAVAQ3KP66 663 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 SETMARQ53H47 684 aaPredicted RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 CARD16Q5EG05 197 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 ARTNQ5T4W7 220 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 ERMARDQ5T6L9 678 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 ALKBH5Q6P6C2 394 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 DPY19L3Q6ZPD9 716 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 TRIM69Q86WT6 500 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 RNF214Q8ND24 703 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 FAM131CQ96AQ9 280 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 HEPHQ9BQS7 1158 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 ZDHHC6Q9H6R6 413 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 GAREM1Q9H706 876 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 NDFIP2Q9NV92 336 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 PCSK1NQ9UHG2 260 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 DMTF1Q9Y222 760 aa12.53□□□□□ -0.4
SPG7-211ENST00000565370 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
SPG7-211ENST00000565370 TP53BP1Q12888 1972 aaPredicted RBP12.52□□□□□ -0.4
SPG7-211ENST00000565370 BUB1O43683 1085 aa12.52□□□□□ -0.41
SPG7-211ENST00000565370 KDELR3O43731 214 aa12.52□□□□□ -0.41
SPG7-211ENST00000565370 LRCH4O75427 683 aa12.52□□□□□ -0.41
SPG7-211ENST00000565370 LEFTY1O75610 366 aa12.52□□□□□ -0.41
SPG7-211ENST00000565370 IGSF6O95976 241 aa12.52□□□□□ -0.41
SPG7-211ENST00000565370 GSRP00390 522 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms