RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ADCY8P40145 1251 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CSKP41240 450 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CLCN6P51797 869 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 NRLP54845 237 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 OXCT1P55809 520 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 FCHO2Q0JRZ9 810 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 WASHC5Q12768 1159 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 SERINC3Q13530 473 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 GRM2Q14416 872 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 DHCR24Q15392 516 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 P3H1Q32P28 736 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 RHBDF2Q6PJF5 856 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 TSSK4Q6SA08 328 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 MTSS1LQ765P7 747 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 MFSD6LQ8IWD5 586 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ADGRG2Q8IZP9 1017 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-205ENST00000564899 WFDC5Q8TCV5 224 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 NSMCE1Q8WV22 266 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 FGF14Q92915 247 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 PNKPQ96T60 521 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 EPB41L5Q9HCM4 733 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 ATP13A1Q9HD20 1204 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 GDF3Q9NR23 364 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 PAK5Q9P286 719 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CLEC4EQ9ULY5 219 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
SF3B3-205ENST00000564899 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
SF3B3-205ENST00000564899 LAMA1P25391 3075 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 BHMG1C9JSJ3 638 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 ANHXE9PGG2 379 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 J3KR12 359 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 PRAMEF11O60813 436 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 OPHN1O60890 802 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 GCATO75600 419 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 NEBLO76041 1014 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 PSMC3P17980 439 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 MCM3P25205 808 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 PTPN3P26045 913 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 MZF1P28698 734 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 RPL22P35268 128 aaKnown RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 NUMBP49757 651 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 IFI35P80217 286 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 GAD2Q05329 585 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 IL10RBQ08334 325 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 LMAN2Q12907 356 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 GPS1Q13098 491 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 ZBTB17Q13105 803 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 FAM182AQ5T1J6 154 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 ARHGEF18Q6ZSZ5 1173 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 CCDC110Q8TBZ0 833 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 FATE1Q969F0 183 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 LRRC45Q96CN5 670 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 VAT1Q99536 393 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 FAM83CQ9BQN1 747 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 ACE2Q9BYF1 805 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 EBF3Q9H4W6 596 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 KIAA1522Q9P206 1035 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 KLHL8Q9P2G9 620 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-205ENST00000564899 VPS28Q9UK41 221 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
SF3B3-205ENST00000564899 SHISA7A6NL88 538 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 CBX4O00257 560 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 CHADO15335 359 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 KDELR3O43731 214 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SEC31AO94979 1220 aaKnown RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 JCHAINP01591 159 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TUBBP07437 444 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 CCNB1P14635 433 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 GDI1P31150 447 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 CD70P32970 193 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 VSNL1P62760 191 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 CUL1Q13616 776 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SLC12A1Q13621 1099 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 PLEKHG6Q3KR16 790 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ANKRD20A2Q5SQ80 823 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ANKRD20A1Q5TYW2 823 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ANKRD20A3Q5VUR7 823 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms