RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CNTFP26441 200 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 GCAP28676 217 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 GBP2P32456 591 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 SERPINB9P50453 376 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 ATP1A2P50993 1020 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 SLC18A1P54219 525 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 RPS24P62847 133 aaKnown RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 ZNF235Q14590 738 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 TMED2Q15363 201 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 KBTBD12Q3ZCT8 623 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 MPPE1Q53F39 396 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 IL31Q6EBC2 164 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 POTEHQ6S545 545 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 CIR1Q86X95 450 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 ARNTL2Q8WYA1 636 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 ALKBH8Q96BT7 664 aaKnown RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 IMP4Q96G21 291 aaKnown RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 OXNAD1Q96HP4 312 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 PRICKLE1Q96MT3 831 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 SLC22A12Q96S37 553 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 FSD1LQ9BXM9 530 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 POLR1EQ9GZS1 481 aaKnown RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 SSU72Q9NP77 194 aaKnown RBP15.82■□□□□ 0.12
COMMD4-210ENST00000564587 NT5MQ9NPB1 228 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 MOCS1Q9NZB8 636 aa15.82■□□□□ 0.12
COMMD4-210ENST00000564587 CXorf51AA0A1B0GTR3 108 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 FAM237BA0A1B0GVD1 139 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 FAM159BA6NKW6 160 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 GREM1O60565 184 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 KRT37O76014 449 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 USP1O94782 785 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 COL6A3P12111 3177 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 ITKQ08881 620 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SLC10A7Q0GE19 358 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 MTM1Q13496 603 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 CAMK1Q14012 370 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SPARCL1Q14515 664 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 RAB30Q15771 203 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 TRABD2AQ86V40 505 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 MPP5Q8N3R9 675 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 KIAA1958Q8N8K9 716 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 ZNF557Q8N988 423 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-210ENST00000564587 ADAMTS19Q8TE59 1207 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 DCAKDQ8WVC6 231 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 MTBPQ96DY7 904 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SMC6Q96SB8 1091 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SELENOSQ9BQE4 189 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 ACE2Q9BYF1 805 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-210ENST00000564587 PDFQ9HBH1 243 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 ARNT2Q9HBZ2 717 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 MRM3Q9HC36 420 aaKnown RBP15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SYBUQ9NX95 663 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 UBA2Q9UBT2 640 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-210ENST00000564587 TBK1Q9UHD2 729 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SOX13Q9UN79 622 aa15.81■□□□□ 0.12
COMMD4-210ENST00000564587 SMG5Q9UPR3 1016 aaKnown RBP15.81■□□□□ 0.12
COMMD4-210ENST00000564587 TRIOBPQ9H2D6 2365 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 H0Y626 953 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 TSPAN3O60637 253 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 TBL1XO60907 577 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 KRT38O76015 456 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 LUC7L3O95232 432 aaKnown RBP15.8■□□□□ 0.12
COMMD4-210ENST00000564587 EPOP01588 193 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CYBBP04839 570 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 RHOP08100 348 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 BRAFP15056 766 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 TCF3P15923 654 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 HOXD9P28356 352 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-210ENST00000564587 ADRA1AP35348 466 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 ACVRL1P37023 503 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 AVPR1AP37288 418 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-210ENST00000564587 GNGT1P63211 74 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 LAMB3Q13751 1172 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CRYMQ14894 314 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 SHHQ15465 462 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 PCID2Q5JVF3 399 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 C9orf50Q5SZB4 431 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 GPR158Q5T848 1215 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 ALG1LQ6GMV1 187 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 RANBP10Q6VN20 620 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 METTL3Q86U44 580 aaKnown RBP15.8■□□□□ 0.12
COMMD4-210ENST00000564587 TMEM135Q86UB9 458 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CTAGE3PQ8IX95 158 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CMTM8Q8IZV2 173 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 IPMKQ8NFU5 416 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 SHKBP1Q8TBC3 707 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 SLC46A2Q9BY10 475 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 PRKD2Q9BZL6 878 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CFAP97Q9P2B7 532 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 CTNNAL1Q9UBT7 734 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 MSRAQ9UJ68 235 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 RPS6KL1Q9Y6S9 549 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 FAM169AQ9Y6X4 670 aa15.8■□□□□ 0.12
COMMD4-210ENST00000564587 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-210ENST00000564587 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms