RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 LAMB3Q13751 1172 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 SPARCL1Q14515 664 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 ANXA2RQ3ZCQ2 193 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 EARS2Q5JPH6 523 aaKnown RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 PAPD7Q5XG87 772 aaKnown RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 ANKRD40Q6AI12 368 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 CCDC70Q6NSX1 233 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 C16orf89Q6UX73 402 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 PCGF5Q86SE9 256 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 TEX19Q8NA77 164 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 RSC1A1Q92681 617 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 TRMT61AQ96FX7 289 aaKnown RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 HMCESQ96FZ2 354 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 REXO5Q96IC2 774 aaKnown RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 FCRL4Q96PJ5 515 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 WDR12Q9GZL7 423 aaKnown RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 SPRTNQ9H040 489 aaPredicted RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 TMEM184CQ9NVA4 438 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 DBF4Q9UBU7 674 aaPredicted RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 GTF2A1LQ9UNN4 478 aa5.43□□□□□ -1.54
LINC00254-201ENST00000563416 ZNF646O15015 1829 aaPredicted RBP5.43□□□□□ -1.54
LINC00254-201ENST00000563416 A0A087WV62 115 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 C2CD4BA6NLJ0 364 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 M0QZQ0 153 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 SOCS2O14508 198 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 DNPH1O43598 174 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 BMP15O95972 392 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ALDOAP04075 364 aaKnown RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 SERPINB2P05120 415 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 MYL6BP14649 208 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 EIF2S2P20042 333 aaKnown RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 HOXD9P28356 352 aaPredicted RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 HOXA7P31268 230 aaPredicted RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 HALP42357 657 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 POLE2P56282 527 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ICA1Q05084 483 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 RBMS2Q15434 407 aaKnown RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 MAPRE1Q15691 268 aaKnown RBP5.42□□□□□ -1.54
LINC00254-201ENST00000563416 HLFQ16534 295 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 AAK1Q2M2I8 961 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ZNF569Q5MCW4 686 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 PRR5LQ6MZQ0 368 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 DHRS13Q6UX07 377 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 KIF6Q6ZMV9 814 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ZNF793Q6ZN11 406 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 FAM57BQ71RH2 274 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ZNF354CQ86Y25 554 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 RFX6Q8HWS3 928 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ZNF34Q8IZ26 560 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 NME8Q8N427 588 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 TSPYL6Q8N831 410 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 UBE2Q2Q8WVN8 375 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 CCDC134Q9H6E4 229 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 SWAP70Q9UH65 585 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 MYH13Q9UKX3 1938 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 UBN2Q6ZU65 1347 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 ABCC12Q96J65 1359 aa5.42□□□□□ -1.54
LINC00254-201ENST00000563416 COL4A1P02462 1669 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 SLC22A23A1A5C7 686 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 AQP12BA6NM10 295 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 F5H423 210 aaPredicted RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 F8W810 466 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 CNOT3O75175 753 aaKnown RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 RPP40O75818 363 aaKnown RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 LARGE1O95461 756 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 ITGA2BP08514 1039 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 DPEP1P16444 411 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 KLRK1P26718 216 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 TLE3Q04726 772 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 TWISTNBQ3B726 338 aaPredicted RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 ZACNQ401N2 412 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 ATPAF1Q5TC12 328 aaPredicted RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 SLC39A5Q6ZMH5 540 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 RINLQ6ZS11 566 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 COPS6Q7L5N1 327 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 RHPN2Q8IUC4 686 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 ADGRF4Q8IZF3 695 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 CNBD1Q8NA66 436 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 FAM47BQ8NA70 645 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 GPR78Q96P69 363 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 TRMOQ9BU70 441 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 ABHD14AQ9BUJ0 271 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 SCNM1Q9BWG6 230 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 OBP2BQ9NPH6 170 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 HYPKQ9NX55 129 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 NIP7Q9Y221 180 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 B3GNT3Q9Y2A9 372 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 AFG3L2Q9Y4W6 797 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 MORC2Q9Y6X9 1032 aaPredicted RBP5.41□□□□□ -1.54
LINC00254-201ENST00000563416 RNF123Q5XPI4 1314 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 SCN4AP35499 1836 aa5.41□□□□□ -1.54
LINC00254-201ENST00000563416 SNED1Q8TER0 1413 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 LOC105369274A0A096LPK9 316 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 A0A0G2JLW4 131 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 LOC102723532A0A0G2JNH3 316 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 LGALS16A8MUM7 142 aa5.4□□□□□ -1.54
LINC00254-201ENST00000563416 NBNO60934 754 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms