RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ANLNQ9NQW6 1124 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 DNAJC28Q9NX36 388 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 ARHGEF38Q9NXL2 777 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 A6NNZ2 444 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 GOLGA8SH3BPF8 625 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
SF3B3-202ENST00000562722 LEFTY1O75610 366 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 PIAS2O75928 621 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 PRB1P04280 392 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 CLCN1P35523 988 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 NEK3P51956 506 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 BPIFB4P59827 614 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 RAPGEF1Q13905 1077 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 DPY19L3Q6ZPD9 716 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 OR7D4Q8NG98 312 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 SNIP1Q8TAD8 396 aaKnown RBP13.27□□□□□ -0.29
SF3B3-202ENST00000562722 TBCBQ99426 244 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 LGMNQ99538 433 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 ABCG4Q9H172 646 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 PRORYQ9H606 182 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 ATP13A1Q9HD20 1204 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 TMPRSS4Q9NRS4 437 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 EVA1BQ9NVM1 165 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 RAI2Q9Y5P3 530 aa13.27□□□□□ -0.29
SF3B3-202ENST00000562722 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 DRGXA6NNA5 263 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 LOC400499M0QZD8 3231 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 CKMT1AP12532 417 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 MYF5P13349 255 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
SF3B3-202ENST00000562722 MAN2A1Q16706 1144 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 GCNT7Q6ZNI0 430 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 Q6ZSR6 202 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 FAM114A1Q8IWE2 563 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 CACTIN-AS1Q8N1I8 211 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 RYBPQ8N488 228 aaPredicted RBP13.26□□□□□ -0.29
SF3B3-202ENST00000562722 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 NAF1Q96HR8 494 aaKnown RBP13.26□□□□□ -0.29
SF3B3-202ENST00000562722 DEPDC7Q96QD5 511 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 HDAC8Q9BY41 377 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 IPO11Q9UI26 975 aaKnown RBP13.26□□□□□ -0.29
SF3B3-202ENST00000562722 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
SF3B3-202ENST00000562722 PCDHB1Q9Y5F3 818 aa13.26□□□□□ -0.29
SF3B3-202ENST00000562722 ILVBLA1L0T0 632 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 H3BM21 787 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 I6L893 689 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 RNF103O00237 685 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 NEMP1O14524 444 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ATXN7O15265 892 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 OPA1O60313 960 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 MPOP05164 745 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ADRB3P13945 408 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 SERPINH1P50454 418 aaKnown RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 DUSP3P51452 185 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 HNRNPKP61978 463 aaKnown RBP eCLIP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 RPS21P63220 83 aaKnown RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 CXADRP78310 365 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 GPR155Q7Z3F1 870 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ABI3BPQ7Z7G0 1075 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 DCP2Q8IU60 420 aaKnown RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 DRC7Q8IY82 874 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 FAM71AQ8IYT1 594 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ZNF683Q8IZ20 524 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 SLC22A18ASQ8N1D0 253 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 MAPK15Q8TD08 544 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 APOLD1Q96LR9 279 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 C1orf74Q96LT6 269 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 HEPHQ9BQS7 1158 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 SLC17A9Q9BYT1 436 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ZYG11BQ9C0D3 744 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 CEP44Q9C0F1 390 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 ZDHHC6Q9H6R6 413 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 CAAP1Q9H8G2 361 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 TMEM51Q9NW97 253 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
SF3B3-202ENST00000562722 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
SF3B3-202ENST00000562722 USP12O75317 370 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 NEBLO76041 1014 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 PAK4O96013 591 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-202ENST00000562722 CYP11B1P15538 503 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 ITGB7P26010 798 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 FLT3P36888 993 aa13.24□□□□□ -0.29
SF3B3-202ENST00000562722 CCNHP51946 323 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms