RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 DGKEP52429 567 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 XRCC4Q13426 336 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 CRY1Q16526 586 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 HNRNPA1L2Q32P51 320 aaKnown RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 ACCSLQ4AC99 568 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 C9orf64Q5T6V5 341 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 CCDC181Q5TID7 509 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 PAPD7Q5XG87 772 aaKnown RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 PKN3Q6P5Z2 889 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 PLPP6Q8IY26 295 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 CCNYQ8ND76 341 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 NAPGQ99747 312 aaPredicted RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 SP110Q9HB58 689 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 FAM86C1Q9NVL1 165 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 UBA2Q9UBT2 640 aaPredicted RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 TTC7AQ9ULT0 858 aaPredicted RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 USP34Q70CQ2 3546 aa12.99□□□□□ -0.33
CDH11-204ENST00000562712 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
CDH11-204ENST00000562712 FAM186AA6NE01 2351 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 HACD1B0YJ81 288 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 H0Y858 1186 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 MATN3O15232 486 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 CEP104O60308 925 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 SYNCRIPO60506 623 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 ZNF821O75541 412 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 EPHX1P07099 455 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 C7P10643 843 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 HOXB2P14652 356 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 PECAM1P16284 738 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 TCP1P17987 556 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 PRKCHP24723 683 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 WASP42768 502 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 CXCL12P48061 93 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 RENBPP51606 427 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 CCR3P51677 355 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 NSUN2Q08J23 767 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH11-204ENST00000562712 CAMK2GQ13555 558 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 STARD3Q14849 445 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 CYTH1Q15438 398 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 TMEM92Q6UXU6 159 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 ALYREFQ86V81 257 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 C1orf210Q8IVY1 113 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 RASGEF1CQ8N431 466 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 CAMKK1Q8N5S9 505 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 TEX26Q8N6G2 289 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 DTWD2Q8NBA8 298 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 MAIP1Q8WWC4 291 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 LGMNQ99538 433 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 FRMD8P1Q9BZ68 369 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
CDH11-204ENST00000562712 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
CDH11-204ENST00000562712 NYNRINQ9P2P1 1898 aaKnown RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 GVINP1Q7Z2Y8 2422 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 TCRBV7S2A1N4TA0A589 114 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 TMCC1O94876 653 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 FGGP02679 453 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 HLA-EP13747 358 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 CCNB1P14635 433 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 SLC10A7Q0GE19 358 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 AP1B1Q10567 949 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 LBRQ14739 615 aaKnown RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 CCDC13Q8IYE1 715 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 OR2A12Q8NGT7 310 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 ACTRT1Q8TDG2 376 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 MAML1Q92585 1016 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 PSKH2Q96QS6 385 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 NAP1L3Q99457 506 aaPredicted RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 POLMQ9NP87 494 aaPredicted RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 PRSS16Q9NQE7 514 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 C2orf42Q9NWW7 574 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 ACTL7AQ9Y615 435 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 SAR1BQ9Y6B6 198 aa12.97□□□□□ -0.33
CDH11-204ENST00000562712 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
CDH11-204ENST00000562712 MCF2LO15068 1137 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 ZBTB24O43167 697 aaPredicted RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 MTSS1O43312 755 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms