RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 REXO1L1PQ8IX06 675 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 MAML1Q92585 1016 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ANP32BQ92688 251 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ZNF419Q96HQ0 510 aaPredicted RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 CELF6Q96J87 481 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 ZC3H10Q96K80 434 aaKnown RBP13.68□□□□□ -0.22
CDH1-204ENST00000562118 SPON2Q9BUD6 331 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 SEMA4AQ9H3S1 761 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 MTG2Q9H4K7 406 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ITM2CQ9NQX7 267 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 DTLQ9NZJ0 730 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 PPM1HQ9ULR3 514 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 HPCAL4Q9UM19 191 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 SCML1Q9UN30 329 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 ACTL7AQ9Y615 435 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 LAMA1P25391 3075 aa13.68□□□□□ -0.22
CDH1-204ENST00000562118 J3KR12 359 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 ZNF217O75362 1048 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 TMCC1O94876 653 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 CTSLP07711 333 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 GJC1P36383 396 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
CDH1-204ENST00000562118 PXNP49023 591 aaPredicted RBP13.67□□□□□ -0.22
CDH1-204ENST00000562118 GBE1Q04446 702 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 CYTH1Q15438 398 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 TMCO4Q5TGY1 634 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 ZNF776Q68DI1 518 aaPredicted RBP13.67□□□□□ -0.22
CDH1-204ENST00000562118 ALG1LQ6GMV1 187 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 Q6ZVU0 165 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 USP30Q70CQ3 517 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 RCOR2Q8IZ40 523 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 TEX26Q8N6G2 289 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 ATP11CQ8NB49 1132 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 TMIEQ8NEW7 156 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 HMGB4Q8WW32 186 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
CDH1-204ENST00000562118 LHX3Q9UBR4 397 aa13.67□□□□□ -0.22
CDH1-204ENST00000562118 IPO11Q9UI26 975 aaKnown RBP13.67□□□□□ -0.22
CDH1-204ENST00000562118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDH1-204ENST00000562118 IGHV1OR15-9A0A0B4J2B8 117 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 ZRANB2O95218 330 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH1-204ENST00000562118 ZFXP17010 805 aaPredicted RBP13.66□□□□□ -0.22
CDH1-204ENST00000562118 DRD3P35462 400 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 CSNK1DP48730 415 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 NUMBP49757 651 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 TPMTP51580 245 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH1-204ENST00000562118 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 DPY19L3Q6ZPD9 716 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 C11orf74Q86VG3 221 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 STK40Q8N2I9 435 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 OR2AP1Q8NGE2 309 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 LRIG1Q96JA1 1093 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 PSKH2Q96QS6 385 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 HERPUD2Q9BSE4 406 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 SLC6A17Q9H1V8 727 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 PABPC3Q9H361 631 aaKnown RBP13.66□□□□□ -0.22
CDH1-204ENST00000562118 CD93Q9NPY3 652 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 UBA2Q9UBT2 640 aaPredicted RBP13.66□□□□□ -0.22
CDH1-204ENST00000562118 RAPGEFL1Q9UHV5 662 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 MBD1Q9UIS9 605 aaPredicted RBP13.66□□□□□ -0.22
CDH1-204ENST00000562118 AMFRQ9UKV5 643 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 SARDHQ9UL12 918 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 FCF1Q9Y324 198 aaKnown RBP13.66□□□□□ -0.22
CDH1-204ENST00000562118 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
CDH1-204ENST00000562118 THADAQ6YHU6 1953 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 GPR179Q6PRD1 2367 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 RPP40O75818 363 aaKnown RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 ADH1BP00325 375 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 CR2P20023 1033 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 MX2P20592 715 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 C5AR1P21730 350 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 TGM2P21980 687 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 CCNCP24863 283 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 NR2C2P49116 596 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 RWDD2BP57060 319 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 PPIDQ08752 370 aaKnown RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 NUMA1Q14980 2115 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 CST6Q15828 149 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 USP39Q53GS9 565 aaKnown RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 MEI1Q5TIA1 1274 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 BBS12Q6ZW61 710 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 PEX26Q7Z412 305 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 AADATQ8N5Z0 425 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 PRCCQ92733 491 aaPredicted RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms